Gene Slin_5107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_5107 
Symbol 
ID8728873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6244932 
End bp6245486 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID 
ProductNADH-ubiquinone/plastoquinone oxidoreductase chain 6 
Protein accessionYP_003389881 
Protein GI284039951 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAT TTCTAAGTTT TTTCAAAACC CTGACGCCAA CCGGCTATCT GTTTCTTTTC 
CTGACAGTGC TTACATTGTT TAGTGCCATT GGCGTTGTTA CGGCGCGTAA CCCCATTTAC
AGTGTATTGG CTCTGATTGC AACGTTCTTT TGCCTGTCGG GGCATTACGT GCTTTTAAAC
GCTCAATTTC TGGCGGCTGT CAATATTATT GTTTACGCAG GTGCCATCAT GGTCTTGTTT
CTGTTCACCA TCATGTTTCT TAACCTTCGG AAAGAAGATG AAGAATCGAA AACAAACTTG
ACCAAAATGG CGTCGGTGGT CGTTGGCGGT ATGCTGATGA TCATGCTCAT CACAATTTTC
CGGGCCAAAA GTGCACAGGT ACCTACTGTC AGTGCTACCT CCTTCAGCGC GAAAACAGGG
TTAGTTGAGA ACTTAGGGCA GTTGCTTTAT AGCGATTACA TTTTGCCTTT TGAACTTGCA
TCGGTCCTTT TCCTGGTCGC CATGGTTGGC GCTGTCATGC TTGGCAAACG CGAAGCAGGT
GACCGGCATT TCTGA
 
Protein sequence
MTEFLSFFKT LTPTGYLFLF LTVLTLFSAI GVVTARNPIY SVLALIATFF CLSGHYVLLN 
AQFLAAVNII VYAGAIMVLF LFTIMFLNLR KEDEESKTNL TKMASVVVGG MLMIMLITIF
RAKSAQVPTV SATSFSAKTG LVENLGQLLY SDYILPFELA SVLFLVAMVG AVMLGKREAG
DRHF