| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5078 |
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| Symbol | |
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| ID | 8728843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6205442 |
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| End bp | 6211021 |
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| Gene Length | 5580 bp |
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| Protein Length | 1859 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | alpha-2-macroglobulin domain protein |
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| Protein accession | YP_003389852 |
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| Protein GI | 284039922 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.364401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACACCC GCCCGTACCT GACCAGCCTG CTGACCGGCC TCCTTTTCGT GTTCGCGTTT
TCCCATTGTT CACGCCTGTC TTTCAATGAC GTATCCGTAG TGGGCCGCAA TTTTAGTGAT
GAAGTCCAGC AGACGCAGAA TTTGACGTTT ACCTTCAATA AAAACATTGG CCCAGCCAGT
CACCTCGATG AGTGGGACTC GACCCAATAC GTGCGTTTCA TTCCGGCCGT TCGCGGCAAA
TACAAGTGGA CGGCTCCCAA CGAGCTTGTC TTTTCGCCCG CCCGCGCTTT CGATCAGGCC
ACCGACTACC GCGCCGAATT GACGGATAAC CTGGTGCGTT ACGCCGACAA AAAAGACCTG
AAAGTATCGG ACGAGGTAAT TGCGTTCCAC ACGCCCTATT TGCAGCTAAC CACCGTCGAA
AACTGGTGGT CACGAGATCG GGCAACCGGG CAGCCCGTAG CCCGAACCCG GCTTAACTTC
AATTACCCGG TATCGTCGAC AGAAGTAATT GAAAAACTGA CCGTTGCCGC CGATGACAAG
GCACTTACGG TTCAGAGCGC CCCCAGCGAT GCGGCTAATT CCGTAGCATT GACGCTCACC
AATGCCCCGT CCCTGAAGAA CGAGCAGCCG CTGTCGCTAA AAATAGACAA GGGAGTGAAA
GTCCCGAAAA CTGCTTTCGT TAGTAAGGAT GCCATCAACG AAACCAGTAC ACTCCCCTCC
CGCTATGCCG TTGACATAGC CGATGTACAG ACAACGTTCG AGAATAACCG GGGCGTCATA
AAAGTTATTA CCACTCAGGA ACTTCAGCCG CAGTCCGGCG GGGCAGCAGG TGATTTGAGC
GCCTATTTCA CGATTCAGCC ATCGGTAGAA ACAACCGCTG AACTAACCGA GAATGGGTTC
ATTATCCGGG GTAATTTCAA CGAGGCCGAT ACCTATGTAC TGACCCTCAC CGACCAGATT
CGCGGGGTGT TGGGCAACAA ACTGGCCGAA CCCGTAACGC GCGATCTGTT TTTCGGGAAG
ATGCCCGCCA GTATTCAGTT TGCCAACAAA AAGGCGCTGT ATTTATCCTC GAAAGGTGCG
CGCAACGTTG GCCTTAACAT TGTTAACGTC CCGAAAGTAC AGGTCAAGAT CGTAAAAGTA
TACGAGAACA ACCTCCTGAA TTACCTGCGG TCGAACCGGT ACGAAGAGTA TACCGAAAAG
GCCAATGGCG AATGGGGGCC ATCGGGCTCG TTCAATTACA GTGCCGATGA AACCGGCGAG
TTGAGCGATG TGCTCGTCGA CAAAACCGTT GAAACGACCG ATCTGCCTAA AGTTCGGGGC
GTATCGGCCC TGAATCTGGC CTTGCCGGAT CAAAACAACA ACTTCCGGGA GCATCCACTC
CGGGGTGTCT ATCTGGTGTC GGTTAACTCA AAAGACGAAG CTTATTTACA GGCTTCTCAA
CTGGTTTCCG TATCGGATAT TGGCCTGATT GCGCGGCATA CGAACGATGA AGTGCTGGTT
TGGGCGAACT CCATCCGCAC CGGTGAGCCC CTGCAAAGTG TGGAAGTCAC ACTGATCAGC
AGCAACAACC AATCCGTGTA CACCCTCAAA ACGGATGGTA CGGGCTTTGT AAAGTTTGAC
AAGGTAAGCG AGAAAGCGCC GGGCTTTAAA ATAGCGTTGT TAACCGCCCG CACAACCACC
CCAGCTACAG CCAGCCAATC GAATCAGGAC GACTTTAACT TCCTGTTTTT GCCCGATACG
CAGGTCGAAA CATCCCGTTT CGAGGTAGAC GGCAAACGCG ATAATCCGTC TGGCTTCGAT
GCCTTCGTCT ATGGCGACCG GGACATCTAC CGCCCCGGCG ATACGATTCA TTTTAACACC
ATTATTCGCT CGCAAACCTG GCAAAGCGTT GGCCAGATTC CTATTGTGGT TCGGGTGCTG
ATGCCCAATG GGCGCGAATT TCGGGCGTTT CGCAAAACGA CAGACGCTCA GGGATCGGTC
ACGACCGATG TGCCCCTCGA CCCGGCTGCG GTAACGGGTT CTTACACCGT CGAAATCCTC
AACGCCAACA ATGTGCTGCT GGCATCGGAA TCGATCAGCG TGGAGGAATT CGTCCCCGAC
CGCATCAAAG TCAACGTACT CACCGACCAG ACGAGTTACA AAGCAGGCCA GACAATTACC
CTGTCGGCTA CGGCCATGAA CCTGTTCGGG CCACCCGCTT CCGACCGGGC TTATGAAATG
GAACTCCAGC TAAAACGAAA GGCCTTTGCG CCCAAAGGTT TCGGCGAGTA TGCGTTCGAC
ATGACCAATG GAACCTCGCC GGGGAGTGAG CCCGCCAAAA CGGATCTGTT CCCCAAAGAA
CTCCGGCAGG GACGCACCAA CGCCAACGGG CAGGCTACCG AACGCTTCCC GATTTCTCAG
CTTTATCAGG ACATCGGTCT GTTGGAAGCG AAGATGTTCG TGACTGTCTT CGATGAAAAC
GGCCGACCGG TCAACCGGCT CCGGCGGCTG GATATTCTAA CGCAGGACAC CTTCTACGGT
CTGCGCTTAC CCGACCGATA CGTAGCCACC AACGCCCCGC TCGCCGTCGA TCTTGTGGCT
CTCGACCCGG CCGGGCAACT GCGGGCGTCG GCCTCGGCGA TTGTTGAGGT GATCAGGTTC
GATTACCAGA CGGTTATCGA AAAAGCCGAC AACAACGTGA AGTACACCAC GAAACGACGG
GAAAAATCGG TTTATACTAA CACCCTGCTG TTCAAAGGTG GCAAAGCGTC GTTCCGCTAC
GTGCCTACAG TTTCAGGAGA ATACGAAGTC CGCGTTCGTC GGCCCGATGC GGCTGCGGAC
AAATACGCGG CTACGGGTTT CTATGCCTAT GGTTTCGGCA GCACCTCGGC CTCCTCGTTC
GAGGTCAGTC AGGAAGGGCA GGTACTCATT GAAACGGGAC AGTCTACCGT ACAAACCGGC
GATAAGGTTA AGGTGCTGTT CAAAGCACCT TTCGACGGCA GGCTGCTCGT CACCGTAGAG
CGCAACCACG TTCTGGAACA GCACTGGCTT ACAACCACCA ATAAATCGGC CGAGTGGAGC
TTTTCCGCTG GTGTCGATCA CCTGCCAAAC GTTTACGTGA CGGCTACCCT GATTCGGGCC
ATCGACGCAA CGAACTTACC GCTCACCGTA GCGCATGGCT TTACCTCAAT TGCCGTCCAG
GATCGGTACA CCCGGTTGCC CGTAACCCTT ACCGCCGTTA CGCAGTCGCG CTCAAAAACG
AAGCAAACGA TTCGTGTTAA AACAGCCGGT AGTGCTCAGG TAACGATTGC CGTTGTGGAC
GAAGGAATTC TCCAGTTAAA AAACTTTAAA ACACCCGATC CGCATGGGTT CTTTTACCAG
AAACGCGCCC TCGAAGTGAC CAGCCATGAT TTGTACGCCC TGCTGTATCC CGAGCTTTCA
CTGCAATCGA AGTCGAGCGT GGGGGGCGAC GGCTACGACC TGGAACGGCG CGTAAACCCG
CTTAGTAACG GACGGGTACG CCTGGTGGCC CTTTGGAGCG GGATTAAGAA AGCGGATTCC
GACGGCAACG TGGAGTTCCC GATTGACATT CCACAGTTTT CGGGCGATCT GCGCGTAATG
GCCGTTGCCT ACAAAAACGA GGCATTCGGG TCGGCCAACA GCAATATAAA AGTTGCTGAC
CCCATCGTGA TCAGTACGGG CGTACCGCGT TTCCTTACTC CCGGCGACCG GGTTGAGCTA
CCCGTCAACC TGAGCAACAC GACCAAACAG GTAGCGACCG TTACCGCCCG TTTGAATCTG
ACGGGGCCAC TGGCAGCGGA TAGCATCAGT ACGCAAAAAC TCACCATTCA ACCCGGTCGA
GAAAGCCGGG CTATCTTCCG GGTAGCCGCC CAACAGGCCA TTGGTGCGGG AGCCATCACG
GTAACGGTCA ATGGCCTGAA CGAAACCTTC ACCGAGAAAA CCGAAATTAC CGTTCGTCCG
GCGGCATCCC TGCAAAAAAC GACCCTGTCG GGCGCGGTTG CTGGTGGCAA AACACAGGCG
ATTCGGCTGG CGGGTGGTTT TTTGCCCGGA ACAGCGCGGG CCAGCGTAAC CCTGAGCCGG
TCGCCGGTGG CGCAGTATGG TCGGGAGTTA TCCTTCCTGC TGGGGTATCC GCACGGGTGT
CTGGAGCAAA CGATTTCGAA AGCATTTCCC CAGCTGTACT TCGCTGATCT GGCCAAACAG
GTATCGGCTA GTACCTACTT CGTCCGAGCC GGCGAAAGCG ACCTGAACCC GGCCACGAAT
ATTAGGCAGG CGGTTCAGCA GGTAGAAGGC TTACAGGCAC AAAACGGCGG CTTTACGATG
TGGCCCGGCA TGGCGGCCGT GTCCGGAAAA TCCAACGTAG ATGCGTGGGC TACGGCTTAT
GCCGTACATT TTCTGGCCGA AGCGCAGGAA GCCGGGTACG AAGTTCGGTC ATCGATACTC
AGTTCAGCGA TTGATTACCT GACAACGCTC ACCAACAGCC CCGCTACCGA AAACGCTGTT
ACGTTCGATG AAGCCGGTGG ACGAACCGTG AAGCAGGTGG CAAGCCGCAC AACGATCTAT
GCCTTGTACG CCCTGTCTGT AGCCGGTAAA CCGAACCGCT CGGCCATGAA TTATTACAAG
CAGAACGCCG GTTTGCTGAC GAACGATAGT CGCTACCTCC TAGCTTCGAC GTTCTTCCGC
GTAGGCGACA CCCGGAGCTA TGAAGCCCTG TTGCCAAAAC GGTTCAGCGA CAATACGACC
GAGCGACAAA CAGGGGGTAG TTATGCTTCT CCCCTGCGCA ACCTGGCCCT CGTTCTCGAT
GTACTTGTCG ATACCAACCC GGACAACATT CAAATTCCAG CGCTGGCAAG GCAACTGTCA
GCGGCTCTGA AACAATCTGC CTATCTGAAT ACGCAGGAAG CGGCTTTTGC TTTTCTGTCG
CTCGGCAAAC TGGCCCGGCA AACGGCGGGC AGTACAGCAA CCGCTACGTT AACAGCCGCC
GGAAAGCCAC TTGGCAATCT TACAAATGCT CCATTGACGA TTAAGCGGGT ACCGACCAAT
GCTCCGCTTA CCCTAAGCGC CAATGGTACC GGCAGCGTTT ATTATTATGC ACAAAGTGAA
GGCATTCCGG CCAGCGGCAA ATTAACCGCC GAAGACAATG GCCTGCAGGT TCGTCGGCAA
TACCTCAACC GCGACGGTAA GCCGATCGGC GATATCCGGC AGAATGACCT GGTGGTTGTT
AAAATTACCC TGGCCAGCCA GAGTGGTCTT ACCGTCGACA ATGTTGTGGT AACAGACCTG
CTTCCAGCGG GTCTGGAAGT GGAAAATCCA CGCCTGACCG GATCACCGGG CCGCGAAGCC
AATGATATGC CCTGGCTCAG TAAATCTAAG TCGGTAGTGA CGGACCAACC CGACCATTTC
GACCTGCGCG ATGACCGGAT CAACTTTTAC ACCACGGCAA CGGGTACTGA ACGAACGTTT
TATTACCTGG CCCGGGCCGT GTCGAAAGGC CGGTTTGTGC TGGGCCCCGT ATCGGCTGAT
GCCATGTACA ATGCGGAGTA TCGCAGTTAT AACGGAGCGG GAATCATAAC CATTCGGTAG
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| Protein sequence | MYTRPYLTSL LTGLLFVFAF SHCSRLSFND VSVVGRNFSD EVQQTQNLTF TFNKNIGPAS
HLDEWDSTQY VRFIPAVRGK YKWTAPNELV FSPARAFDQA TDYRAELTDN LVRYADKKDL
KVSDEVIAFH TPYLQLTTVE NWWSRDRATG QPVARTRLNF NYPVSSTEVI EKLTVAADDK
ALTVQSAPSD AANSVALTLT NAPSLKNEQP LSLKIDKGVK VPKTAFVSKD AINETSTLPS
RYAVDIADVQ TTFENNRGVI KVITTQELQP QSGGAAGDLS AYFTIQPSVE TTAELTENGF
IIRGNFNEAD TYVLTLTDQI RGVLGNKLAE PVTRDLFFGK MPASIQFANK KALYLSSKGA
RNVGLNIVNV PKVQVKIVKV YENNLLNYLR SNRYEEYTEK ANGEWGPSGS FNYSADETGE
LSDVLVDKTV ETTDLPKVRG VSALNLALPD QNNNFREHPL RGVYLVSVNS KDEAYLQASQ
LVSVSDIGLI ARHTNDEVLV WANSIRTGEP LQSVEVTLIS SNNQSVYTLK TDGTGFVKFD
KVSEKAPGFK IALLTARTTT PATASQSNQD DFNFLFLPDT QVETSRFEVD GKRDNPSGFD
AFVYGDRDIY RPGDTIHFNT IIRSQTWQSV GQIPIVVRVL MPNGREFRAF RKTTDAQGSV
TTDVPLDPAA VTGSYTVEIL NANNVLLASE SISVEEFVPD RIKVNVLTDQ TSYKAGQTIT
LSATAMNLFG PPASDRAYEM ELQLKRKAFA PKGFGEYAFD MTNGTSPGSE PAKTDLFPKE
LRQGRTNANG QATERFPISQ LYQDIGLLEA KMFVTVFDEN GRPVNRLRRL DILTQDTFYG
LRLPDRYVAT NAPLAVDLVA LDPAGQLRAS ASAIVEVIRF DYQTVIEKAD NNVKYTTKRR
EKSVYTNTLL FKGGKASFRY VPTVSGEYEV RVRRPDAAAD KYAATGFYAY GFGSTSASSF
EVSQEGQVLI ETGQSTVQTG DKVKVLFKAP FDGRLLVTVE RNHVLEQHWL TTTNKSAEWS
FSAGVDHLPN VYVTATLIRA IDATNLPLTV AHGFTSIAVQ DRYTRLPVTL TAVTQSRSKT
KQTIRVKTAG SAQVTIAVVD EGILQLKNFK TPDPHGFFYQ KRALEVTSHD LYALLYPELS
LQSKSSVGGD GYDLERRVNP LSNGRVRLVA LWSGIKKADS DGNVEFPIDI PQFSGDLRVM
AVAYKNEAFG SANSNIKVAD PIVISTGVPR FLTPGDRVEL PVNLSNTTKQ VATVTARLNL
TGPLAADSIS TQKLTIQPGR ESRAIFRVAA QQAIGAGAIT VTVNGLNETF TEKTEITVRP
AASLQKTTLS GAVAGGKTQA IRLAGGFLPG TARASVTLSR SPVAQYGREL SFLLGYPHGC
LEQTISKAFP QLYFADLAKQ VSASTYFVRA GESDLNPATN IRQAVQQVEG LQAQNGGFTM
WPGMAAVSGK SNVDAWATAY AVHFLAEAQE AGYEVRSSIL SSAIDYLTTL TNSPATENAV
TFDEAGGRTV KQVASRTTIY ALYALSVAGK PNRSAMNYYK QNAGLLTNDS RYLLASTFFR
VGDTRSYEAL LPKRFSDNTT ERQTGGSYAS PLRNLALVLD VLVDTNPDNI QIPALARQLS
AALKQSAYLN TQEAAFAFLS LGKLARQTAG STATATLTAA GKPLGNLTNA PLTIKRVPTN
APLTLSANGT GSVYYYAQSE GIPASGKLTA EDNGLQVRRQ YLNRDGKPIG DIRQNDLVVV
KITLASQSGL TVDNVVVTDL LPAGLEVENP RLTGSPGREA NDMPWLSKSK SVVTDQPDHF
DLRDDRINFY TTATGTERTF YYLARAVSKG RFVLGPVSAD AMYNAEYRSY NGAGIITIR
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