| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_5076 |
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| Symbol | |
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| ID | 8728841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 6202394 |
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| End bp | 6204844 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | penicillin-binding protein 1C |
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| Protein accession | YP_003389850 |
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| Protein GI | 284039920 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.634438 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAACGG CTGGGTCAAT ATTCAGAAAC GTTGGCGGTA TTGCCAAACG GTTGTGGCGA
TACCGTCTCG TAAAAACGTT TATCGCAGCG GTATTGATTT TTTTAGGGCT TGATTTCTCT
TTTCCCATCG ACACCGCCGT TCCCTATTCA ACCCTAATCA CCGCCCGCGA CGGGTCCATT
CTGCATGCCT TCCTGAGCCG CGATGATAAG TGGCGAATGT ACGCGGAGCT GGACGAGATT
ACCCCTACCC TGCGCGACGC CATTCTGTTC AAGGAAGACA AATATTTCTG GTATCATCCC
GGCTTCAACC CTATAGCCAT GCTCCGGGCC GCTGCCCGAA ACCTGCTGAC CGGTCGGCGA
ACGTCGGGGG CATCGACCAT TACGATGCAA ACCGTTCGCC TGCTCGAACC CCGTGAACGA
ACCTACACCA GCAAGGTTAT CGAGCTATTC CGGGCGCTGC AACTGGAGTT ACACTTTTCT
AAAGAGCAGA TTCTCCAGCT TTACCTGAAT CTGATCCCCT ACGGCGGCAA TATCGAGGGG
CTGAAGTCGG CTTCGCTGCT CTACTTCGGC AAAACACCGG ATTTGCTAAG TCTGGCCGAA
CTCACCACCC TGACCATTAT TCCGAATCGG CCGTCGAGTT TGCGGTTGGG CGTTCATAAT
GCGCTGGTTG TTCAGGCGCG TAACCGCTGG CTTACCCGCT TCCGCACGAG CCACCTCTTC
GACGAAACCG TCATTGCCGA TGCCCTCAAC GAACCCCTCA CCGCTTATCG CCGGGAGGCT
CCACAGTTGG CACCACACCT CGCACGTCGG CTTAAATCAG AGAACCCGAA TGCCCCCATC
GTTCGGTCGT CACTGAATCC ATCCACACAA GCCACCACCG AACGACTGAT GCAGCAGTAC
GCCAATCGCA TCAGGGCGTA CGATATCCAC AATGCAGCGG TGTTAATTGT GGATAACTTA
TCGAGGGAAG TGATCGCCTA TGTGGGTTCG GCCGACTTCA CGAATACGCT TGATGGCGGG
CAGGTGGATG GCATACAGGC GGTGCGGTCG CCGGGGAGCG CGTTGAAACC CATTTTGTAC
GGACTGGCGT TCGATGCGGG CATAATTACC CCGAAGACAA AACTAGCCGA TGTACCAACC
AACTTCAGCG GTTACCAACC CGACAATTAC GACCGGCGTT TCAACGGCCC CGTTACGGCC
GAGTTTGCCC TCGCTAATTC CCTCAACATT CCGGCGGTGG CCCTCCTAAA AGAAATCGGT
ACGCCGACCC TCGTCTCGAC GCTCCGGAAA GCGGGCTTTT CGACCGTCAA AAAACAAGCA
AAGGAGTTGG GATTATCCAT GATTCTGGGC GGCTGCGGTG TCACGCTGGA AGAAATGACG
AAACTGTATA CGGGTTTGGC CAATGGTGGG ATGGTTGGGG AGTTGGCGTT TACCCCATCG
GGACGCCGAA CCGCCCCGGC CCCTCCCCTT AAGGAAGGGG AGGGGAGAAA TAGGGCGCTC
TTGTTGCCCC CCTCCCCTTC CTTAAGGGGT GGGGTAAACA CCGAGATTCC CCTCCTCTCA
CCCGAAGCGG CTTACCTGGT TACCCACACC CTCACACAAA TTACCCGGCC GGACTTGCCG
AATAACTTCG ATAACAGTTA TCACCTGCCG CGAATCGCCT GGAAAACGGG AACCTCCTAC
GGTCGGCGGG ATGCGTGGAG TATCGGGTAC AACCAGCGGT ACACGATTGG CGTGTGGGTG
GGTAATTTTT CGGGCGTAGG CGTGGCCGAG TTAAGCGGGG CGAATACAGC TACCCCTTTG
CTGTTTCAGC TTTTCAACGT ACTGGATTAC AACTCATCCT TGGGTTGGTT CAGAGCCCCG
GATGCCCGCT CGAAATTAAG CACCCGGCTG ATCTGCCCCG AAACGGGCGA GGTGCCGGGC
GAGTTTTGTA CCAATCCCGT AACCGACTAC TGCATCATGG GCGTTTCGCG GTACAGACGC
TGCCAGCACC AAAAGGCCGT CTTTACCAAT TCGGCGGGCA CGATTTCTTA CTGCGCCTAC
TGCCTGCCGG ATACGGGCGC CGTTCGACGT GCTTACCCGA ATGTATCGCC GGAAGTAATG
GCGTTTTACC AAAGCCATCG TATTCCGGTT CAAATCCCGC CCCCTCACAA CCCATCCTGC
GAACGGGTCT TTGAGGGCAC CGGCGGTAAC CATCTGGGGC CGCGCATTAC GAGTCTGAAC
GACGGCAGCG AGTATTTCAT CAACCCCAAA CAAGCCGCTG AACTAGAGCT TAGTTGCCAG
ACTTCTACCG ATGTGCAAAC CGTATTCTGG TATTTGAATG ATAAACTATA CCGGCGGGCT
AAACCAACAG AAGCCGTGTT TTTCAAACCC CGGCCGGGGG CGTTAAAGAT TTCCTGCGCC
GATGATAAAG GCGGCAGCAA TGACATACGA ATCCTGATCA AACCGGAATA A
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| Protein sequence | MLTAGSIFRN VGGIAKRLWR YRLVKTFIAA VLIFLGLDFS FPIDTAVPYS TLITARDGSI
LHAFLSRDDK WRMYAELDEI TPTLRDAILF KEDKYFWYHP GFNPIAMLRA AARNLLTGRR
TSGASTITMQ TVRLLEPRER TYTSKVIELF RALQLELHFS KEQILQLYLN LIPYGGNIEG
LKSASLLYFG KTPDLLSLAE LTTLTIIPNR PSSLRLGVHN ALVVQARNRW LTRFRTSHLF
DETVIADALN EPLTAYRREA PQLAPHLARR LKSENPNAPI VRSSLNPSTQ ATTERLMQQY
ANRIRAYDIH NAAVLIVDNL SREVIAYVGS ADFTNTLDGG QVDGIQAVRS PGSALKPILY
GLAFDAGIIT PKTKLADVPT NFSGYQPDNY DRRFNGPVTA EFALANSLNI PAVALLKEIG
TPTLVSTLRK AGFSTVKKQA KELGLSMILG GCGVTLEEMT KLYTGLANGG MVGELAFTPS
GRRTAPAPPL KEGEGRNRAL LLPPSPSLRG GVNTEIPLLS PEAAYLVTHT LTQITRPDLP
NNFDNSYHLP RIAWKTGTSY GRRDAWSIGY NQRYTIGVWV GNFSGVGVAE LSGANTATPL
LFQLFNVLDY NSSLGWFRAP DARSKLSTRL ICPETGEVPG EFCTNPVTDY CIMGVSRYRR
CQHQKAVFTN SAGTISYCAY CLPDTGAVRR AYPNVSPEVM AFYQSHRIPV QIPPPHNPSC
ERVFEGTGGN HLGPRITSLN DGSEYFINPK QAAELELSCQ TSTDVQTVFW YLNDKLYRRA
KPTEAVFFKP RPGALKISCA DDKGGSNDIR ILIKPE
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