Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4975 |
Symbol | |
ID | 8728739 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6061330 |
End bp | 6062535 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389752 |
Protein GI | 284039822 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.52355 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000664128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTTAC GATACGTTCT CAAAGCAAGC CGCTCGTTCA GCGTGGCGTT TTTCATTGCC CTGTACCTGA TCGGGTGTAC GTCAAAAACC GCCGATCCGC AACCCGTTGC CGATCAATAT CTGGTAAGCA GCAGTGACGT TGCTACGATT TCCAAAGATC AGTTGGTGGC TCAGGCATCA GCCATTAGCC CCCTGTATGC ACTGCTATTG AAACAGGGAA TATCGGTGGT GAAGCTTGTT TATAAGACTA AAAACTGGGA TGGCACAGCC ATTCAGGCAT CGGGTCTGCT AATTGTGCCC AACACGACCA CTGCCGTTCC CATGATCAGT CAGCAACACG GGACCATTTT TGATGATGCT GACGCCCCTT CCAATTTCGG GCCGGAGAGC GAAGCCTATC AGTTCGCCAC GATTTTTGCG TCTATCGGCT ACATTATGGT CTGTCCGGAT TACATTGGGT TTGGGGCATC CAAGAGTCTG CCGCATACTT ACGAAAACCG GACGAGTCTG GCACAGGCCA GTTTAGATAT GCTGCGGGCT GCCCGTGAGT ATATAGGCAG TCATTCGGAG GTCAAATGGG ATTCCCGGCT CTATATGGCG GGGTATTCAG AAGGGGGGTA CGCTACCATG GCGCTGTACA AAAAGATGCA GGATGAAGTG CCCACGGAAT TTAACCTGCG GGCGGTTTCC TGCGGTGCGG GAGCCTACGA TAAAACCAGT TTCATGAAGG CTTTGCTGAC GCAGAAATCG GCGGGGGTAG CGCAGTGGAA CCGGGCATTC TTGTGGGTAT TATTAACCTA CGACCAGATT TATAAACTTA ACCGACCGCT GTCTTTCTAC TTCAAGGAAC CTTATCTGAC CGATATTCAG AAAAACCGGC AACTGGCTAC GCTGGACGTA AGCTTCGACC AGGTACTGAC TGATTCATTC AAAGCGGGCA TCCTGAACGG AACGGATACG GCCTTTCTCA ACGCCGTGGC CGATAACAAC ATTTACGACT GGAAGCCGCT GACCACGCTG CAACTGTATC ATGGAGATGC CGATCCGCAG GTGTACTACC TGAACTCCAA AAACGCCTAC GATGCTATGC AGGCGCGGGG AGCGGGCAAA ACCGTACAGC TCTTCACCAG CGTCGGTAAA ACCCACGTTC AAACGATTCC AGATTGGCTG GCTGGTACGT ATACGCTCTT TACAACGGTG CAGTAA
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Protein sequence | MNLRYVLKAS RSFSVAFFIA LYLIGCTSKT ADPQPVADQY LVSSSDVATI SKDQLVAQAS AISPLYALLL KQGISVVKLV YKTKNWDGTA IQASGLLIVP NTTTAVPMIS QQHGTIFDDA DAPSNFGPES EAYQFATIFA SIGYIMVCPD YIGFGASKSL PHTYENRTSL AQASLDMLRA AREYIGSHSE VKWDSRLYMA GYSEGGYATM ALYKKMQDEV PTEFNLRAVS CGAGAYDKTS FMKALLTQKS AGVAQWNRAF LWVLLTYDQI YKLNRPLSFY FKEPYLTDIQ KNRQLATLDV SFDQVLTDSF KAGILNGTDT AFLNAVADNN IYDWKPLTTL QLYHGDADPQ VYYLNSKNAY DAMQARGAGK TVQLFTSVGK THVQTIPDWL AGTYTLFTTV Q
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