Gene Slin_4975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4975 
Symbol 
ID8728739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6061330 
End bp6062535 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389752 
Protein GI284039822 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.52355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000664128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATTTAC GATACGTTCT CAAAGCAAGC CGCTCGTTCA GCGTGGCGTT TTTCATTGCC 
CTGTACCTGA TCGGGTGTAC GTCAAAAACC GCCGATCCGC AACCCGTTGC CGATCAATAT
CTGGTAAGCA GCAGTGACGT TGCTACGATT TCCAAAGATC AGTTGGTGGC TCAGGCATCA
GCCATTAGCC CCCTGTATGC ACTGCTATTG AAACAGGGAA TATCGGTGGT GAAGCTTGTT
TATAAGACTA AAAACTGGGA TGGCACAGCC ATTCAGGCAT CGGGTCTGCT AATTGTGCCC
AACACGACCA CTGCCGTTCC CATGATCAGT CAGCAACACG GGACCATTTT TGATGATGCT
GACGCCCCTT CCAATTTCGG GCCGGAGAGC GAAGCCTATC AGTTCGCCAC GATTTTTGCG
TCTATCGGCT ACATTATGGT CTGTCCGGAT TACATTGGGT TTGGGGCATC CAAGAGTCTG
CCGCATACTT ACGAAAACCG GACGAGTCTG GCACAGGCCA GTTTAGATAT GCTGCGGGCT
GCCCGTGAGT ATATAGGCAG TCATTCGGAG GTCAAATGGG ATTCCCGGCT CTATATGGCG
GGGTATTCAG AAGGGGGGTA CGCTACCATG GCGCTGTACA AAAAGATGCA GGATGAAGTG
CCCACGGAAT TTAACCTGCG GGCGGTTTCC TGCGGTGCGG GAGCCTACGA TAAAACCAGT
TTCATGAAGG CTTTGCTGAC GCAGAAATCG GCGGGGGTAG CGCAGTGGAA CCGGGCATTC
TTGTGGGTAT TATTAACCTA CGACCAGATT TATAAACTTA ACCGACCGCT GTCTTTCTAC
TTCAAGGAAC CTTATCTGAC CGATATTCAG AAAAACCGGC AACTGGCTAC GCTGGACGTA
AGCTTCGACC AGGTACTGAC TGATTCATTC AAAGCGGGCA TCCTGAACGG AACGGATACG
GCCTTTCTCA ACGCCGTGGC CGATAACAAC ATTTACGACT GGAAGCCGCT GACCACGCTG
CAACTGTATC ATGGAGATGC CGATCCGCAG GTGTACTACC TGAACTCCAA AAACGCCTAC
GATGCTATGC AGGCGCGGGG AGCGGGCAAA ACCGTACAGC TCTTCACCAG CGTCGGTAAA
ACCCACGTTC AAACGATTCC AGATTGGCTG GCTGGTACGT ATACGCTCTT TACAACGGTG
CAGTAA
 
Protein sequence
MNLRYVLKAS RSFSVAFFIA LYLIGCTSKT ADPQPVADQY LVSSSDVATI SKDQLVAQAS 
AISPLYALLL KQGISVVKLV YKTKNWDGTA IQASGLLIVP NTTTAVPMIS QQHGTIFDDA
DAPSNFGPES EAYQFATIFA SIGYIMVCPD YIGFGASKSL PHTYENRTSL AQASLDMLRA
AREYIGSHSE VKWDSRLYMA GYSEGGYATM ALYKKMQDEV PTEFNLRAVS CGAGAYDKTS
FMKALLTQKS AGVAQWNRAF LWVLLTYDQI YKLNRPLSFY FKEPYLTDIQ KNRQLATLDV
SFDQVLTDSF KAGILNGTDT AFLNAVADNN IYDWKPLTTL QLYHGDADPQ VYYLNSKNAY
DAMQARGAGK TVQLFTSVGK THVQTIPDWL AGTYTLFTTV Q