| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4971 |
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| Symbol | |
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| ID | 8728735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6056658 |
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| End bp | 6057530 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003389748 |
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| Protein GI | 284039818 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0504817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000361988 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAAGCTC TTTTTGAAAA GTTAGTATTC AGTGAGCAAA GCTCATTGCT CGTTCGCCGA
TTTCAGATTC CGTATTTTGA TGCTCCCTGG CATTATCATC CGGAGTATGA ACTAACCTAT
ATCGTCAAGA GCCACGGCCG TCGATTTGTT GGGGACCACG TCGATTCGTT TCAGGCGGGC
GATCTGGTAC TGCTCGGGCC AGACTTACCG CATTTCTGGC GGAACGATGA CGACTATTAT
CAGGCTGGTT CTGTTCAGAA AGCTGTGTCT ATAGTGGTGC AGTTCCCGGC TACGTTTCCC
GAGCGGGGAT TGGCAACGGT ACCCGAAGCG GAGTCGGTAC GTAAACTGCT CGAACGGTCC
CGGTATGGCC TCCGCTTTAG TCAGGCTATG AGCCAGTCTG TCAGCGAACT CCTGGAACAG
TTGCCGCAGC AGACCGGCTT GCCCCAACTG TTGGGTCTGC TAACGATACT AAACGAACTG
GCCACCGATC AGGAGGCTTA TCTATTGGCC AGTGACGGCT ACCAGCTGGC CCCCGGCGCG
GCCGAAACCG AGCGAATGAA GCGAGTGCTC GAATTTGTTC TGCTGCATTT TCGGGAAGAG
ATTCGCATAG AATCCATTGC GTCGATTGCC GGAATGGCCC CGGCGGCTTT CTGCCGGTAT
TTTAAAAACC GTACCCGTAA AACGTTTGTC GAATACCTGA ACGAACTACG CATTGGCCAC
GCCCGTAAGC TGCTCACAAC GACTGATCTA AGTATCAGTC AGGTTAGTCT CGACTGCGGG
TATAACAACA GTTCACATTT TCATCGGCAG TTTAAGCTCT ATACCAGCAT AACACCTTTT
CAATACCAGG CGCTGGCAAA AGGAAAAGGA TAA
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| Protein sequence | MKALFEKLVF SEQSSLLVRR FQIPYFDAPW HYHPEYELTY IVKSHGRRFV GDHVDSFQAG
DLVLLGPDLP HFWRNDDDYY QAGSVQKAVS IVVQFPATFP ERGLATVPEA ESVRKLLERS
RYGLRFSQAM SQSVSELLEQ LPQQTGLPQL LGLLTILNEL ATDQEAYLLA SDGYQLAPGA
AETERMKRVL EFVLLHFREE IRIESIASIA GMAPAAFCRY FKNRTRKTFV EYLNELRIGH
ARKLLTTTDL SISQVSLDCG YNNSSHFHRQ FKLYTSITPF QYQALAKGKG
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