Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4970 |
Symbol | |
ID | 8728734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6055238 |
End bp | 6056524 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Glycine hydroxymethyltransferase |
Protein accession | YP_003389747 |
Protein GI | 284039817 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00413503 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000000204325 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGACCG CCACCACCAC CCGCGATACG CAGGTATTTG ACCTAATTGC TAAAGAACAA CACCGGCAGG AGTCGGGTAT TGAATTAATA GCCTCCGAAA ACTTCGTGTC GCCCGCTGTT ATGGAAGCGG CCGGTAGTGT CCTGACCAAT AAATACGCCG AAGGCCTGCC CGGCAAACGG TACTATGGCG GTTGCGAAGT GGTCGATCAG GTTGAACAGA TTGCCATCGA CCGTGCCAAA GAACTCTTCG GCGCTTCCTG GGTCAATGTG CAGCCGCACT CAGGTGCCAA TGCCAACACG GCCGTATTTC TGGCCTGCCT GCATCCCGGC GACACCATTC TGGGTTTCGA CCTTTCGCAC GGCGGTCACC TCACCCATGG TTCATCGGTA AATATTTCAG GTAAATATTT CCGCCCTACC TTTTACGGTG TCGAAAAAGA AACCGGTGTT ATTAACTACG ATGTGGTTGA AGAAACCGCC AAGCGCGAAC GCCCGAAGCT GTTGATCTGT GGTGCTTCGG CCTATAGCCG CGATTGGGAT TACGCCCGGC TGCGCGCCAT TGCCGACGAG ATTGGCGCCT TACTGCTGGC CGACGTATCG CACCCGGCCG GTCTGATCGC CAAAGGGCTG TTGAATGATC CGCTGGCGCA TGCCCATATC GTTACTACAA CAACCCACAA AACGCTGCGC GGCACACGGG GTGGTATCAT CATGATGCGG AACGACTTCG AGAATCCATT CGGTATTAAA ACGGTAAAAG GCGAAACCCG TCTTATGTCG TCGCTGCTGG ATTCGGGCGT GTTTCCGGGC ACACAGGGCG GACCGTTAGA ACATATTATT GCCGCAAAAG CCGTTGCCTT TGGCGAAGCG TTGAGCGACG ATTTCTATGA TTATGCCGTT CAGGTGAAAG CCAACGCCCA GGCAATGGCC AACGCTTTCC TGAGTCGGGG TTACGAAATT ATTTCGGGCG GTACGGATAA CCACCTGATG CTGATCGACC TGCGTTCGAA AGGGCTGACG GGTAAACTGG CCGAGAACAC ACTGATTAAA GCCGATATAA CCATCAACAA AAACATGGTT CCGTTCGACG ATAAGTCGCC GATGGTAACG TCGGGGATGC GCGTTGGTAC GGCCGCTATG ACAACCCGTG GCCTAAAAGA ATCGGACATG GAGCAAATTG TCGTATATAT CGACAAGGTG CTGATGAACC ACGACGACGC GGCAACACTG GCAACCGTTA AAGAAGAAAT CAACGAGTGG ATGAAAGCAT TTCCGCTCTA TGCTTAG
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Protein sequence | MTTATTTRDT QVFDLIAKEQ HRQESGIELI ASENFVSPAV MEAAGSVLTN KYAEGLPGKR YYGGCEVVDQ VEQIAIDRAK ELFGASWVNV QPHSGANANT AVFLACLHPG DTILGFDLSH GGHLTHGSSV NISGKYFRPT FYGVEKETGV INYDVVEETA KRERPKLLIC GASAYSRDWD YARLRAIADE IGALLLADVS HPAGLIAKGL LNDPLAHAHI VTTTTHKTLR GTRGGIIMMR NDFENPFGIK TVKGETRLMS SLLDSGVFPG TQGGPLEHII AAKAVAFGEA LSDDFYDYAV QVKANAQAMA NAFLSRGYEI ISGGTDNHLM LIDLRSKGLT GKLAENTLIK ADITINKNMV PFDDKSPMVT SGMRVGTAAM TTRGLKESDM EQIVVYIDKV LMNHDDAATL ATVKEEINEW MKAFPLYA
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