Gene Slin_4970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4970 
Symbol 
ID8728734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6055238 
End bp6056524 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content53% 
IMG OID 
ProductGlycine hydroxymethyltransferase 
Protein accessionYP_003389747 
Protein GI284039817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00413503 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000000204325 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGACCG CCACCACCAC CCGCGATACG CAGGTATTTG ACCTAATTGC TAAAGAACAA 
CACCGGCAGG AGTCGGGTAT TGAATTAATA GCCTCCGAAA ACTTCGTGTC GCCCGCTGTT
ATGGAAGCGG CCGGTAGTGT CCTGACCAAT AAATACGCCG AAGGCCTGCC CGGCAAACGG
TACTATGGCG GTTGCGAAGT GGTCGATCAG GTTGAACAGA TTGCCATCGA CCGTGCCAAA
GAACTCTTCG GCGCTTCCTG GGTCAATGTG CAGCCGCACT CAGGTGCCAA TGCCAACACG
GCCGTATTTC TGGCCTGCCT GCATCCCGGC GACACCATTC TGGGTTTCGA CCTTTCGCAC
GGCGGTCACC TCACCCATGG TTCATCGGTA AATATTTCAG GTAAATATTT CCGCCCTACC
TTTTACGGTG TCGAAAAAGA AACCGGTGTT ATTAACTACG ATGTGGTTGA AGAAACCGCC
AAGCGCGAAC GCCCGAAGCT GTTGATCTGT GGTGCTTCGG CCTATAGCCG CGATTGGGAT
TACGCCCGGC TGCGCGCCAT TGCCGACGAG ATTGGCGCCT TACTGCTGGC CGACGTATCG
CACCCGGCCG GTCTGATCGC CAAAGGGCTG TTGAATGATC CGCTGGCGCA TGCCCATATC
GTTACTACAA CAACCCACAA AACGCTGCGC GGCACACGGG GTGGTATCAT CATGATGCGG
AACGACTTCG AGAATCCATT CGGTATTAAA ACGGTAAAAG GCGAAACCCG TCTTATGTCG
TCGCTGCTGG ATTCGGGCGT GTTTCCGGGC ACACAGGGCG GACCGTTAGA ACATATTATT
GCCGCAAAAG CCGTTGCCTT TGGCGAAGCG TTGAGCGACG ATTTCTATGA TTATGCCGTT
CAGGTGAAAG CCAACGCCCA GGCAATGGCC AACGCTTTCC TGAGTCGGGG TTACGAAATT
ATTTCGGGCG GTACGGATAA CCACCTGATG CTGATCGACC TGCGTTCGAA AGGGCTGACG
GGTAAACTGG CCGAGAACAC ACTGATTAAA GCCGATATAA CCATCAACAA AAACATGGTT
CCGTTCGACG ATAAGTCGCC GATGGTAACG TCGGGGATGC GCGTTGGTAC GGCCGCTATG
ACAACCCGTG GCCTAAAAGA ATCGGACATG GAGCAAATTG TCGTATATAT CGACAAGGTG
CTGATGAACC ACGACGACGC GGCAACACTG GCAACCGTTA AAGAAGAAAT CAACGAGTGG
ATGAAAGCAT TTCCGCTCTA TGCTTAG
 
Protein sequence
MTTATTTRDT QVFDLIAKEQ HRQESGIELI ASENFVSPAV MEAAGSVLTN KYAEGLPGKR 
YYGGCEVVDQ VEQIAIDRAK ELFGASWVNV QPHSGANANT AVFLACLHPG DTILGFDLSH
GGHLTHGSSV NISGKYFRPT FYGVEKETGV INYDVVEETA KRERPKLLIC GASAYSRDWD
YARLRAIADE IGALLLADVS HPAGLIAKGL LNDPLAHAHI VTTTTHKTLR GTRGGIIMMR
NDFENPFGIK TVKGETRLMS SLLDSGVFPG TQGGPLEHII AAKAVAFGEA LSDDFYDYAV
QVKANAQAMA NAFLSRGYEI ISGGTDNHLM LIDLRSKGLT GKLAENTLIK ADITINKNMV
PFDDKSPMVT SGMRVGTAAM TTRGLKESDM EQIVVYIDKV LMNHDDAATL ATVKEEINEW
MKAFPLYA