Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4961 |
Symbol | |
ID | 8728725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 6046504 |
End bp | 6047277 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389738 |
Protein GI | 284039808 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000000559103 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGGAGC ATATTGAATT AAAGAAGGTC TGGCTGGTGG GCTGGCTTTG TCTAATCCTG CTGGGCTCAC CGCCAGTAGC CTGGTCGCAG ACGAAAAGGG CTGATTCAAC TTTGGTAAAG CCCACCGTAG TTAACGCCCG CGACGATCGG TCTCCGATGC GTGTACGTTA CCCGGACCCG GAGCATCTGC GCGACAAACA AACGGACCAC GACTACCAAT ACACTAGCGA AGCCCCTCCG CCCGAAAATC CACTGGCCCG TTTCTGGGTC TGGCTTATGC GTAAGCTGGG CAGCTTTCTG TCCAGTGAAG CTTACCAGAA CGTTTGGCAG TATGTAATTC TGGTAGCAAT TGCCAGCGCG GCTGTTTACC TGCTCATGAA GGCCGAAGTA CTGGGTTTCC TGTTTTCGAA GAAAGCACAG TCGGTTGATC TGGCGTACGA GAACCTAACC GAAAATATTC ATGAGATCAA CTTCGATTCG GCCGTTGAAG AGGCTATCAG CCAGCGTAAT TTCCGGCTGG CGGTTCGGTT GATGTACCTG CAAACGCTCA AACACTTGAG TGATGCAGGG CGCATTCAGT ACAAACCCGA CAAAACCAAC CGGCAGTATG TTCATGAATT AGTCAACTCG TCACTTCAAC CTGAATTTGA ACACCTCACC CGTCAGTTCG AATTTACCTG GTATGGCGAT TTTCCCATCG ACGAAAGTCG GTTCAGGGCA CTGCAAACCC GCTTTACCGC GTTCAACGGG GCGAACAAAC AATTGACAAC GTAA
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Protein sequence | MKEHIELKKV WLVGWLCLIL LGSPPVAWSQ TKRADSTLVK PTVVNARDDR SPMRVRYPDP EHLRDKQTDH DYQYTSEAPP PENPLARFWV WLMRKLGSFL SSEAYQNVWQ YVILVAIASA AVYLLMKAEV LGFLFSKKAQ SVDLAYENLT ENIHEINFDS AVEEAISQRN FRLAVRLMYL QTLKHLSDAG RIQYKPDKTN RQYVHELVNS SLQPEFEHLT RQFEFTWYGD FPIDESRFRA LQTRFTAFNG ANKQLTT
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