Gene Slin_4961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4961 
Symbol 
ID8728725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6046504 
End bp6047277 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content51% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389738 
Protein GI284039808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000559103 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGAGC ATATTGAATT AAAGAAGGTC TGGCTGGTGG GCTGGCTTTG TCTAATCCTG 
CTGGGCTCAC CGCCAGTAGC CTGGTCGCAG ACGAAAAGGG CTGATTCAAC TTTGGTAAAG
CCCACCGTAG TTAACGCCCG CGACGATCGG TCTCCGATGC GTGTACGTTA CCCGGACCCG
GAGCATCTGC GCGACAAACA AACGGACCAC GACTACCAAT ACACTAGCGA AGCCCCTCCG
CCCGAAAATC CACTGGCCCG TTTCTGGGTC TGGCTTATGC GTAAGCTGGG CAGCTTTCTG
TCCAGTGAAG CTTACCAGAA CGTTTGGCAG TATGTAATTC TGGTAGCAAT TGCCAGCGCG
GCTGTTTACC TGCTCATGAA GGCCGAAGTA CTGGGTTTCC TGTTTTCGAA GAAAGCACAG
TCGGTTGATC TGGCGTACGA GAACCTAACC GAAAATATTC ATGAGATCAA CTTCGATTCG
GCCGTTGAAG AGGCTATCAG CCAGCGTAAT TTCCGGCTGG CGGTTCGGTT GATGTACCTG
CAAACGCTCA AACACTTGAG TGATGCAGGG CGCATTCAGT ACAAACCCGA CAAAACCAAC
CGGCAGTATG TTCATGAATT AGTCAACTCG TCACTTCAAC CTGAATTTGA ACACCTCACC
CGTCAGTTCG AATTTACCTG GTATGGCGAT TTTCCCATCG ACGAAAGTCG GTTCAGGGCA
CTGCAAACCC GCTTTACCGC GTTCAACGGG GCGAACAAAC AATTGACAAC GTAA
 
Protein sequence
MKEHIELKKV WLVGWLCLIL LGSPPVAWSQ TKRADSTLVK PTVVNARDDR SPMRVRYPDP 
EHLRDKQTDH DYQYTSEAPP PENPLARFWV WLMRKLGSFL SSEAYQNVWQ YVILVAIASA
AVYLLMKAEV LGFLFSKKAQ SVDLAYENLT ENIHEINFDS AVEEAISQRN FRLAVRLMYL
QTLKHLSDAG RIQYKPDKTN RQYVHELVNS SLQPEFEHLT RQFEFTWYGD FPIDESRFRA
LQTRFTAFNG ANKQLTT