| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4937 |
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| Symbol | |
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| ID | 8728701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 6012012 |
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| End bp | 6014414 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | polysaccharide export protein |
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| Protein accession | YP_003389714 |
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| Protein GI | 284039784 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00100729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATTA AAGACAAATT GTCACATTTT CTCCATCGTT CACGCTCGTT TCACGCTATT
TTACTGGTTT TTCTACTGGC AGGGGCTTTC CAGGCAGTAG CTCAGCGTCC CCGCTCGCGA
GTAGACCAGT TGAGTGACGA AGACGTACAG AACTTCTACC GAAAGGCACA GGCAAGTGGC
TTGAGCGAAG TTCAGATTGA ACAGGCGGCC ATGTCGCAGG GGTATACGCT CGATGACATC
GCTAAAATGA GGAAGCGCAT GGCGCAGATC CGTACGTTGA CTTCCCTGCC ACAAAATCAA
CTTCCCAAAG AAAGCTTTAA GGGGAGTCGG GGTCTTCCAT CCGATCTGTC CATGCGATCA
GATACCCTGG AGGTCGACAG TATTCGCAAA GACACGACTA AAAAACTTAA GGTGTTTGGT
GCGTCTTTGT TCGAAAATGC CAAAATGTCA TTTGAGCCCA ACTTGCGGAT CGCAACACCC
CGTAATTATA TCGTAGGGCC TGATGACGAA ATAAGAGTTG ATATTTCGGG TGCTTCAACC
GGCGATTTTC AGTTGAAAGT TAGTCCCGAT GGAACGGTAA AAGTGCCTGA TCTGGCTCCG
ATCTTTGTCA GTGGTTTAAC CATTGAACAG GCCGAGCAGC GCATCATTGC CCGCTTGCGC
CAGGGTGGCT ATCAGGGACT GGGTCGGCCG GGTAGCGGCA CCAGCGCCAA CGTTACGTTA
ACGAATATCC GTAGCATTCG GGTTATTCTG GTAGGGGAGG TCGTTCGGCC GGGAACCTAT
ACCATCTCTT CGCTGGGCTC CGTTATGAAT GCGCTCTACC TGGCAGGCGG GCCAAACCCA
GAAACCGGAT CATTCCGGAA AATCAATGTT GTTCGGGGCA ATCGCGTTGT CAGAACCCTT
GACTTATACG ACTTCATTTT ACGGGCCGAC CAGCGCGACA ACATTCGCCT ACAGGATCAG
GACGTAATTC GCGTAGCCGA TTACGAAGCA CACGTTGAAC TCACCGGACA AGTTCGTCGG
CCCGCTATTT TTGAAATACT ACCCGGCGAA ACCCTCAAAA CGGTGCTGGC CTTTGCCGGT
GGTTTCGGCG ATGACGCCTA TCGGGCTTCC ATTACACTCC GGCGTAACAC CGCCCGCGAA
CGCCGGATCG TTACGATAAC GGAGGAACAG ATTGCCACAT TCGTCCCAAA AGCTGGTGAT
AAATATAACG TTGGCAAAAT TCTGGAGCGT TACGAAAATC GCGTTCAGGT GGCCGGTGCC
GTTATGCGCC CCGGCGATTA CTCCCTCGAA CCGGGACTGG AAACGGTCCG TCAGCTGATC
ACCCGGGCCG ATGGTCTGCG TAAAGATGCA TTTACCAACC GGGCAACTAT TGTCCGCGAG
CGCGCTGACA TGGACCGTGA GAATCTGTCT TTCGATCTGG GTAAACTCAT GCGTGGCGAA
GTTGCCGATA TTCCGCTGCA AAGCCAGGAT AGCTTGACGG TTCTGTCCAT TCGCGAGCTT
CGGGAACCGT ATTACGTAAC CATTGAGGGA GCGGTGAACA TGCCCGATAC CATCGACTTC
ATTGCCAACA TGAGCGTTGC TGATCTGATC GCTCATGCCG GGGGCTTTCA GGAAGGGGCC
AAGCCTAACC TGATTGAGGT AGCCCGTCGT ATCCGTCAGG ACTCGGCAGG GATACGCAAA
ACTATGATGG AGATATACCG CTTTGCCATT GATCGGGATC TGCAAATCAC CCCTATGGAG
GCCACTCCCG GCAGTTCGCC GGAATTTCGG CTACAACCGT TCGATATCGT TTATGTACGA
ACATCGCCCA ACTACGAATC GCAGCGGCAG GTGATGGTGT ATGGCGAAGT GATGCAACCC
GGAAACTACG CCATTGCCAA TCGCCAGGAG CGGATTGGGG ATGTGATCAA GCGTGCTGGT
GGACTGAAAC CCGAAGCCTA CATGGCCGGA GCGCAGTTTC GCCGGAATGG ACAGTTAATC
GGGAATGACC TGCGGGACCT TATCGCTAAC CCGAATGTGG AAGAGAACTT ATTACTTCAG
GATAAGGATA CGTTATACAT TCCCCGCCGG TCAGAGATTA TTGCCGTGCA GGGCGCTGTG
TTGAATCCTT CATCCATTAG TTTTAAAGAA GACTTCAAGT TTGACGACTA CATAAGTGAA
GCGGGTGGTT TCACGGACAA TGCCCGCCAA AGGAAAGCTT ACATAGTTTA CCCAAACGGA
CGTAAAGACC GCTCACATAG CTTTCTGTTT TTCGTCTCCC GCCCCCGTGT GGATCCTGGC
TCTATCATTA ATGTCCCATT CAAGCCAATT GATTCGAATC GACTAACGGC AGGTGAACGA
ATTGGTATAT TTTCATTACT GGCAACGGTA TCCATTGCGC TCATAAATGT TTTGCTTCGC
TAA
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| Protein sequence | MFIKDKLSHF LHRSRSFHAI LLVFLLAGAF QAVAQRPRSR VDQLSDEDVQ NFYRKAQASG
LSEVQIEQAA MSQGYTLDDI AKMRKRMAQI RTLTSLPQNQ LPKESFKGSR GLPSDLSMRS
DTLEVDSIRK DTTKKLKVFG ASLFENAKMS FEPNLRIATP RNYIVGPDDE IRVDISGAST
GDFQLKVSPD GTVKVPDLAP IFVSGLTIEQ AEQRIIARLR QGGYQGLGRP GSGTSANVTL
TNIRSIRVIL VGEVVRPGTY TISSLGSVMN ALYLAGGPNP ETGSFRKINV VRGNRVVRTL
DLYDFILRAD QRDNIRLQDQ DVIRVADYEA HVELTGQVRR PAIFEILPGE TLKTVLAFAG
GFGDDAYRAS ITLRRNTARE RRIVTITEEQ IATFVPKAGD KYNVGKILER YENRVQVAGA
VMRPGDYSLE PGLETVRQLI TRADGLRKDA FTNRATIVRE RADMDRENLS FDLGKLMRGE
VADIPLQSQD SLTVLSIREL REPYYVTIEG AVNMPDTIDF IANMSVADLI AHAGGFQEGA
KPNLIEVARR IRQDSAGIRK TMMEIYRFAI DRDLQITPME ATPGSSPEFR LQPFDIVYVR
TSPNYESQRQ VMVYGEVMQP GNYAIANRQE RIGDVIKRAG GLKPEAYMAG AQFRRNGQLI
GNDLRDLIAN PNVEENLLLQ DKDTLYIPRR SEIIAVQGAV LNPSSISFKE DFKFDDYISE
AGGFTDNARQ RKAYIVYPNG RKDRSHSFLF FVSRPRVDPG SIINVPFKPI DSNRLTAGER
IGIFSLLATV SIALINVLLR
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