Gene Slin_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4928 
Symbol 
ID8728692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp6002648 
End bp6003352 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content37% 
IMG OID 
Productglycosyl transferase family 2 
Protein accessionYP_003389705 
Protein GI284039775 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.749845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAA TTAGCGTGTG CATGGCCACT TATAATGGGG AGCTATTTTT GAAAAACCAG 
TTATCGTCAA TTCTTTGTCA ACTTGGTGGA AATGACGAAA TCATTGTATC TGATGATGGG
TCAGTAGATG ATACTATTTC AATAATAAAC AGCTTTTCAG ATAGTAGAAT TAAAGTATTT
TTCAATAAAA ATCGGCACGG ACCTGTTGGA AACTTTGAGA ACGCTCTCGA ACATTCATCA
GGAGAATATA TATTTTTAGC AGATCAGGAT GATATTTGGC TCTCTGAAAA GGTTGATACT
ATTTATGAGC TGCTTTTGGA TTACGATCTT GTATTGACAG ACTGTGAAGT CACGGATCAT
CTTTATAATA CATTAACTCC ATCTTTTTTT ACCTATAGAC GAAGTCATAA TGGCTTTTGG
GCCAATATTT ATCGAAATTC TTATATGGGT TGCTGTATGG CGTTTCGACG CGACGTTTTG
CGGTATGCTC TTCCTTTTCC TAAAAGAATC CACATGCATG ACTGGTGGAT TGGGTTACTT
GTTGAAGCTA AAGGGCGAGT GGTATTTTAT AACAAACCGT TAATTAAATA TGTAAGACAT
GGTAGTAATG CGTCGCCAAC TGGAGGAATA GGGTTTGGCT TCAAGGAGCA GCTAGCAAAC
CGTTTTTGGC TTTTATTAAA CCTAGCTCAA CGATTGTTAG TTTAA
 
Protein sequence
MIRISVCMAT YNGELFLKNQ LSSILCQLGG NDEIIVSDDG SVDDTISIIN SFSDSRIKVF 
FNKNRHGPVG NFENALEHSS GEYIFLADQD DIWLSEKVDT IYELLLDYDL VLTDCEVTDH
LYNTLTPSFF TYRRSHNGFW ANIYRNSYMG CCMAFRRDVL RYALPFPKRI HMHDWWIGLL
VEAKGRVVFY NKPLIKYVRH GSNASPTGGI GFGFKEQLAN RFWLLLNLAQ RLLV