Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4928 |
Symbol | |
ID | 8728692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 6002648 |
End bp | 6003352 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | |
Product | glycosyl transferase family 2 |
Protein accession | YP_003389705 |
Protein GI | 284039775 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.749845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGAA TTAGCGTGTG CATGGCCACT TATAATGGGG AGCTATTTTT GAAAAACCAG TTATCGTCAA TTCTTTGTCA ACTTGGTGGA AATGACGAAA TCATTGTATC TGATGATGGG TCAGTAGATG ATACTATTTC AATAATAAAC AGCTTTTCAG ATAGTAGAAT TAAAGTATTT TTCAATAAAA ATCGGCACGG ACCTGTTGGA AACTTTGAGA ACGCTCTCGA ACATTCATCA GGAGAATATA TATTTTTAGC AGATCAGGAT GATATTTGGC TCTCTGAAAA GGTTGATACT ATTTATGAGC TGCTTTTGGA TTACGATCTT GTATTGACAG ACTGTGAAGT CACGGATCAT CTTTATAATA CATTAACTCC ATCTTTTTTT ACCTATAGAC GAAGTCATAA TGGCTTTTGG GCCAATATTT ATCGAAATTC TTATATGGGT TGCTGTATGG CGTTTCGACG CGACGTTTTG CGGTATGCTC TTCCTTTTCC TAAAAGAATC CACATGCATG ACTGGTGGAT TGGGTTACTT GTTGAAGCTA AAGGGCGAGT GGTATTTTAT AACAAACCGT TAATTAAATA TGTAAGACAT GGTAGTAATG CGTCGCCAAC TGGAGGAATA GGGTTTGGCT TCAAGGAGCA GCTAGCAAAC CGTTTTTGGC TTTTATTAAA CCTAGCTCAA CGATTGTTAG TTTAA
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Protein sequence | MIRISVCMAT YNGELFLKNQ LSSILCQLGG NDEIIVSDDG SVDDTISIIN SFSDSRIKVF FNKNRHGPVG NFENALEHSS GEYIFLADQD DIWLSEKVDT IYELLLDYDL VLTDCEVTDH LYNTLTPSFF TYRRSHNGFW ANIYRNSYMG CCMAFRRDVL RYALPFPKRI HMHDWWIGLL VEAKGRVVFY NKPLIKYVRH GSNASPTGGI GFGFKEQLAN RFWLLLNLAQ RLLV
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