| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4908 |
|---|
| Symbol | |
|---|
| ID | 8728672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 5977127 |
|---|
| End bp | 5978806 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| Protein accession | YP_003389685 |
|---|
| Protein GI | 284039755 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCTTT CGTTACTCAT TTTTATTCCC TTGATTGGCT CGCTCGTGGT AGCGCTGCTG
CCCGAACGCC AGACCGGACT CTTTCGATGG GTGGCGCTGG CCGTAACGCT GGTCGAACTG
GTGCTGGCGG GTATGGCCTG GGCTGGATTT GACAAAGCCG AAGCCGGGTA TCAATTCCTT
CAGCAGGTCG ATTGGATTAC GCTGCCGTTG GGAAATCTGG GCGTCGTATC CATCGACTAT
CTGGTTGGCG TAGACGGGAT AAGTCTGCCG CTGGTGGTCC TGTCGGCGGT AGTGATGCTC
ATTGGCGTAA TATCTTCCTG GCGCATGACG CATCGGCAAA AAGCCTACTA TTCGCTCTAT
CTGTTACTTA CGGGTACCAT CATGGGCTGC TTCGTGGCGC TCGATTTCTT CTTGTTCTTT
CTGTTCTTCG AGTTCATGCT CCTGCCGATG TATTTCCTGA TCGGCTTATG GGGCGGACCA
CGTCGGGAAT ACGCGTCGAT CAAGTTCTTT CTTTACACAC TGCTCGGCTC ACTCTTGATT
TTGCTGGTCA TGATTGCGCT GTATTTATCT GTCATGGACC CGGTGAGTAC AGCGGTAGTA
GCCGGGCTCG TGTCAGACTC ATCGGAGGTT ACGGATGAGG TGATCCGGAG TATCCAGTCG
TTTCTCCAGA ATGGCCAATT GAATACGTCG CAGGTGGTGC ATACGTTCGA TATGCGCTAT
CTGGCCGACG GCCGCAATTA CCTGCCCAAT ACGTTCCTGA ATCCTGCGGC TGAGCCGATT
GTGCTGGGCC TTCCGGCACG GATGCTGGCC TTCTGGGCCA TATTTATTGG CTTTGCCATT
AAATTACCCA TCGTCCCGCT GCATACCTGG CTACCCGATG CCCACGTCGA AGCGCCAACG
CCCGTATCGG TCATTCTGGC CGGGGTGTTG CTCAAAATCG GTGGCTACGG GTTTATTCGG
ATTGCCTGGG ATTTCTTCCC CGATGGAGCC GCCCAATATG CGCAGGTACT GGCCGGACTT
GGGGTGTTGT CAATCGTGTA CGGTGGTCTG AATGCCCTGG CTCAGGCTGA TCTCAAAAAG
ATGATCGCCT ATTCGTCGGT GTCGCACATG GGTTTTGTAT TGTTGGGGGT TGCCTCATTA
ACGGCTGAGG GGGTCAACGG CGCTATTTAT CAGATGGTGA GCCACGGTAT TCTGTCGGCC
ATGCTCTTCC TGATTGTGGG CGTGGTGTAT GACCGTACCC ACGACCGCCG GATCGAGTCG
TACCGGGGTT TGCTGCAACT GATGCCGCAG TATGCCACCC TCACGGCAAT TGCGTTCTTT
GGTTCGCTGG GTTTACCCGG TTTTTCGGGC TTTGTGGGTG AGCTGTTTAC CCTGATGGGC
AGCTTTCAGT CGGAGTGGTT GCCCGGCTGG TTCACGGCGG TGGCCACGTT GGGTATTCTG
CTGGCTGCGG CTTATTTTCT CTGGACGTTC CAGCGCATGT TTTTTGGTTC GCCCTGGGTT
GGCGCGTTTG CGTCGGAATC GAGTAATGAA TTCGTTATTG CTGATCTGAC CCTTCGGGAG
AGGTTGATGT TAATTCCGCT GGGAGCAATG GCGCTGGTGC TGGGCCTGTT CCCCAATCTG
GTCTTCAACC TGACGAATGC TACCGTAACG CAGTGGCTGA CGAAGTTCGC TGTGGAGTAA
|
|---|
| Protein sequence | MILSLLIFIP LIGSLVVALL PERQTGLFRW VALAVTLVEL VLAGMAWAGF DKAEAGYQFL
QQVDWITLPL GNLGVVSIDY LVGVDGISLP LVVLSAVVML IGVISSWRMT HRQKAYYSLY
LLLTGTIMGC FVALDFFLFF LFFEFMLLPM YFLIGLWGGP RREYASIKFF LYTLLGSLLI
LLVMIALYLS VMDPVSTAVV AGLVSDSSEV TDEVIRSIQS FLQNGQLNTS QVVHTFDMRY
LADGRNYLPN TFLNPAAEPI VLGLPARMLA FWAIFIGFAI KLPIVPLHTW LPDAHVEAPT
PVSVILAGVL LKIGGYGFIR IAWDFFPDGA AQYAQVLAGL GVLSIVYGGL NALAQADLKK
MIAYSSVSHM GFVLLGVASL TAEGVNGAIY QMVSHGILSA MLFLIVGVVY DRTHDRRIES
YRGLLQLMPQ YATLTAIAFF GSLGLPGFSG FVGELFTLMG SFQSEWLPGW FTAVATLGIL
LAAAYFLWTF QRMFFGSPWV GAFASESSNE FVIADLTLRE RLMLIPLGAM ALVLGLFPNL
VFNLTNATVT QWLTKFAVE
|
|---|
| |