Gene Slin_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4893 
Symbol 
ID8728657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5958762 
End bp5959541 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF124 
Protein accessionYP_003389670 
Protein GI284039740 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGCTC ACGAAATTGA TTACAAGATT ATTGGCGAAG ACATCCAGAT CGTTGAAATA 
GAACTGGACC CCAACGAAAC CGTTATTGCT GAAGCGGGCT CGATGCTTTA TATGGAGGAC
GGCATCACGT TCGAAACCAA AATGGGCGAT GGCTCGCAGC CAGACCAGGG TTTTCTGGGT
AAACTGCTGC AGGCCGGTTC GCGCATGGTT ATGGGCGAAT CGCTGTTCAT GACGCACTTC
ACCAACCGGG GCGTTGGCAA ACGCAAAGTA GCTTTTTCGG CACCGTACCC CGGCACAATT
ATGCCGATCA ACATGGCGAA TGTCTATGGC AATACGCTTA TCGTTCAGAA AGACGCTTTC
CTGTGTGCAG CTCTCGGTAC GAAGCTGAGT ATTCACTTCA ACCAGAAAAT AGGCGCTGGT
TTATTTGGTG GCGAAGGTTT CATTCTGGAG AAAGTACAAA GCGACGGGAT GGCCTTTATC
CATGCCGGCG GTGTGGTCAT TGAGCGGACG CTGAACAATG AAACCTTACG CGTCGACACG
GGCTGCGTTG TTGGTTTTGA GCCGAGTATT AACTTCGACA TTCAGCGGGC GGGTGGTCTG
CGCAGCATGG TTTTCGGTGG TGAGGGCTTG TTTTTGGCGA CACTTCGCGG CTCCGGTAAA
GTCTGGATTC AGTCGATGCC AATTTCTAAA CTCGTACAAC GCCTGTCGAC CGGAAGTGCC
CAGAGCCACA AGGAAAGCGG CTCGGTGCTG GGGCAGTTGG GGAATTTGTT TGAAGGCTGA
 
Protein sequence
MYAHEIDYKI IGEDIQIVEI ELDPNETVIA EAGSMLYMED GITFETKMGD GSQPDQGFLG 
KLLQAGSRMV MGESLFMTHF TNRGVGKRKV AFSAPYPGTI MPINMANVYG NTLIVQKDAF
LCAALGTKLS IHFNQKIGAG LFGGEGFILE KVQSDGMAFI HAGGVVIERT LNNETLRVDT
GCVVGFEPSI NFDIQRAGGL RSMVFGGEGL FLATLRGSGK VWIQSMPISK LVQRLSTGSA
QSHKESGSVL GQLGNLFEG