Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4849 |
Symbol | |
ID | 8728613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5906187 |
End bp | 5908214 |
Gene Length | 2028 bp |
Protein Length | 675 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389626 |
Protein GI | 284039696 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.895704 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.860028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATACG CCGATAAAGT ACGGACTTTC TTTTCTGGCA AAGTAGTTCG TAAAGACCTG ACAGCTCAAA TAAAAGGAAG TGCCGTGGTG CCGACTTATG TGCTGGAGTA CCTATTAGGT CAATACTGTG CCTCAGATGA TGAAGTGATC GTTGCCGATG GTATTGAGCG CATTAAAGAT ATTATCAAGT CAAATTTTGT GCATCGTAGC GATGCTGAAT TGGTTAAGTC GCGCGTACGT GAGCAGGGTG AGCACCGAAT TATCGATAAG ATAAATGTGG TGCTAAATGA CAAGCAGAAT CAATATGAGG CTGATTTTGC CAATTTAATG TTGCGCGATG TGCCTATTGT CGACCGCATC GTGACCCAGC ATAAGAAGCT ACTAAGTGGG GCGGGGGTTT GGTGTATCAT CGACCTAAGC TATGATCATA GCCGGGATGC TAAAGTACGC TGGGGCATTG AGTCAATAAA GCCTATTCAG GTATCTGCCA TCGACGTACA GGAATATTTG GGTGCCCGGC CTCAGTTCAC TACAGACGAA TGGCTGGATC TGTTGCTGCA TAGCATTGGG TATGAACCCC AATATTTTAG CCGTCGTGAT AAATTTATAC AGTTATCACG ACTCATTCCT TTTGTTGAAA GCAATTTTAA CTTTATCGAA CTTGGTCCAA AGGGAACTGG TAAATCTCAC GTCTTCTCAG AGCTATCTCC ACACGGCGTA TTGGTATCAG GAGGTGATGT TTCTAAAGCA ACCCTATTTG TCAATAATAA TACAAGGCAA TTGGGTCTAG TAGGCTTTTG GGATGTGGTA GCTTTGGATG AATTCGAGCA AGAAAAGAAC AGCAAAACCA TTGATGGAGA CTTAGTAAAA ATTCTTCAGA ATTACATGGC CAACCAATCG TTCAACCGGG GTAATGATAC CATCATGGCA ACCGCTTCCA TGGCCTTTGT GGGTAATACA AAGCACACGG TGCCGTATAT GCTTAAAAAC AGTCACTTGT TTGAGTCCAT ACCCCAAGGT TACCTAAAAG GGGCTTTCCT GGACCGGATG CATCTGTATA TTCCTGGTTG GGAAGTTCGA ATTCTGAAAG AAAGCGTATT TAGCCATGGG CATGGCTTTA TTGTTGACTA TTTAGCGGAA ATCCTGCGTG AGATGCGTCG GCTCGATTTT TCCGATTTAC TTTCATCGGT TGCAATTCTG GATCCATCCC TAACCCAACG GGATAAATTA GCTGTTTTCA AAACGTTTTC GGGCTTAGCA AAGCTGTTAT ATCCGCATCG GCAACTGACC GAAGAGGAAG CAGAAGAGTT AGTCGAATTT GCAATGGAAG GCCGTCGCCG GGTTAAAGAA CAACTGTATC TTATTGATGA GACCTTCCAA CAACAGCCAT CCCTGTTTCG ATACGTACAT AAGGCCACTG GCCAGGAGAG GGAAGTTGCT TTGCTGGAAA GTCTAAGCCT GGACTCAACG TTCGAAATTC CAGACGTGAT TACGGTTGAT GTCGACTCAG GAAGTGTAAA TACGACAAGT ACAAATCCTA CGACCAACAA ACTATTTATA GGTGATAGGG CATTCAAGGA GAACCAGACC GGTTTGTCAT TTCGCAAGTT ATTCGGTGAT TATATTGAAG GGGCTAAACA AATTTCACTG ATTGATCCAT ACATCCGTCA GCCTCATCAA TACCGATTGC TTATGGAATT TCTGGTGTTA ATCTCCGAAA GAAAACCACT TGACCAAGAA GTAGACGTTG AAGTAGTTAC CTACTTTGAG TCACCGGATA AAGAGATAGA AGCGAAAGCT AACTTTGATC AGTTAACTGA ATCTGTTGCA GACCTAGGGA TTCAGTTAAC TTACCGCTTT GATCCCGCAA TCCATGACCG GTTCATTTAT CTGAACAACG GCTGGCGAAT AAAATTAGGA ATGGGATTGG ATATGTTTCA AAAGCCTGAC TTAATGGATA TAGCTAGTGT CTTCCCAGAA AAGAGAAAGT GTAAAAAACG TTTTGAAATA AGTTATCAGC GTATTTAA
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Protein sequence | MEYADKVRTF FSGKVVRKDL TAQIKGSAVV PTYVLEYLLG QYCASDDEVI VADGIERIKD IIKSNFVHRS DAELVKSRVR EQGEHRIIDK INVVLNDKQN QYEADFANLM LRDVPIVDRI VTQHKKLLSG AGVWCIIDLS YDHSRDAKVR WGIESIKPIQ VSAIDVQEYL GARPQFTTDE WLDLLLHSIG YEPQYFSRRD KFIQLSRLIP FVESNFNFIE LGPKGTGKSH VFSELSPHGV LVSGGDVSKA TLFVNNNTRQ LGLVGFWDVV ALDEFEQEKN SKTIDGDLVK ILQNYMANQS FNRGNDTIMA TASMAFVGNT KHTVPYMLKN SHLFESIPQG YLKGAFLDRM HLYIPGWEVR ILKESVFSHG HGFIVDYLAE ILREMRRLDF SDLLSSVAIL DPSLTQRDKL AVFKTFSGLA KLLYPHRQLT EEEAEELVEF AMEGRRRVKE QLYLIDETFQ QQPSLFRYVH KATGQEREVA LLESLSLDST FEIPDVITVD VDSGSVNTTS TNPTTNKLFI GDRAFKENQT GLSFRKLFGD YIEGAKQISL IDPYIRQPHQ YRLLMEFLVL ISERKPLDQE VDVEVVTYFE SPDKEIEAKA NFDQLTESVA DLGIQLTYRF DPAIHDRFIY LNNGWRIKLG MGLDMFQKPD LMDIASVFPE KRKCKKRFEI SYQRI
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