| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4847 |
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| Symbol | |
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| ID | 8728611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5899854 |
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| End bp | 5903513 |
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| Gene Length | 3660 bp |
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| Protein Length | 1219 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | |
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| Product | putative restriction enzyme |
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| Protein accession | YP_003389624 |
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| Protein GI | 284039694 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000521229 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.767237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCC GCCGACTTAA ACCCTTTGCC CAGCAATGCC GCCAGCGATT AATGCAGGGC
ATTGCCGACC GACTAAATTA CTGGGGCTTT GTGGCCACCA GCCGCCAACC CGTCGAAACG
CTCGAAAAAC TCGACGGCGG TTACCTCTTC CGGGGGCAGG TTTTTGATGA AACCGACGTC
CCTCGTCGCT GGCAACTGCT GGCTGGCGCG GTACAGACGC ATGGTTTTGC GCATGTGCAG
GAAACCGTGG CCTATACGTG GTTTAACCGG CTGATGGCAC TCAAGATTTT GGCGCATAAT
AACTACCAGC CCGATGTGCT GAGTTTTACT CGTCCGGATA CACCAACACC CCAGTTGCTT
GATGAAGCCC GGCGCGCCCA GCCGCCTTAC CTCTCCGAGC AACTGTATCG GATACTGCGG
CCCCTGTTAA CGGACTATAC CCGCGAAACC GATGCCTTTG CCCGGCTGCT AACGGCCTAC
TGCGTGCAGC ACCCCGTACT GCACCGGCTC TTCGATGTGG CCGACGATGT ATCGACCTTG
TTGTTGCCCG CCGATATGCT GGGCGAAAGC GGTGTGCTGG CATTTATAAA TAACAGTACG
GCCATCAGTG AAGCTGATTT TAAGCAGGTC GAGCTGATTG GCTGGCTCTA CCAGTTCTAC
ATTGCCGACC GAAAAGACGA GGTTTTTGCC GGGTTTAAAA AAGGGTTGAA AGCAGGCCCT
GACGATATTC CGGCCGCGAC CCAGATTTTT ACGCCCCGCT GGATCGTCTC CTATCTGGTC
GAAAATACCC TGGGGCGGCT CTACCTTGAC CAAAACCCTG ACTCATCGCT AGGCGAGACG
ATGCGGTATT TGGTCAAAAC CGAAAAGAAG CCAACTACTG TTGCTGACGA AACCGGTCAA
AGCAGGGAGG CTGCTCCAAC GACTCTTTCC TTCAACGAGG GTGCCTTGCC AATGCAGGCC
GATGTCTCGG TGGCGTCTCT GCGCCTTATT GACCCCGCTT GTGGTTCGGG CCACATTCTG
GTTACGGCCT TCGACTTGCT CATGCGCATC TACAATGAAG AAGGCTACAC CAAACGACAG
GCTGTGACCG CCATCCTGAA CAGCCACCTT GTAGGCCTTG ACCTCGACGA ACGAGCCGCC
CAACTCAGCC GCTTTGCCCT GCTGCTCAAA GCCAGCCAGT ATTGGCCCGG TGTGTGGGAT
ACCGATATTA TCCCGGACGT TTGGGCTATG CCCGATCCCT GGATGCCCAC CGATACAGAC
CTGTTGAGCT TTCTTGGTAC AGATGGGAGA GAGTTTCTGG CCGAATTGCA CACTGCCCTG
CGGCTTATGC AACAGAGTCA GAACCTTGGC TCGGTTATGC GGCCTAACCT GTCCCGAGCG
GGCCGGACGC ACTTGCGTAA TCGACTATTA ATATACGAAG CACAGTCCGA CGATGCAATC
GACATTTTTG CAGGCACGAA TCGCCAGCAT CTACGCCACT ACATACATGT TTTGCTGATC
TTGACTGATC ACTATGCGGC TGTGGCAGCT AACCCGCCGT ATATCAATTC AGGTAGTATG
GAAGCAGTAT TGAAAGGGTA CATTGAAAAA CATTACTACC GATCAAAAAT CAACTTATCG
TTATCATTTA TGGAGAAATG CTGCGATATG TGTCAGAGTA AAGGAATTTG GGGGCTAATA
AATCAAGATT CATGGTTACT CAAAACTTCG TCGGTCGAAT TACGAAAATT GCTATTGGAT
ACAAACGCAG TAGAGTCTGT TTTGCATTTA GGGCCAAATG CATTTGATGA ATTGGGTGGT
GAAGTAGTAC AAACAACGGC AGCCACCTTT CGAAAATCAG AATCGCATCC TTCGTCAAGT
GGTATATACT ATGACTTGAC AATGTTTGGG TCAAGCGCAA AAAAAGAAGG TGCGTTTTTA
GCCGGTGTCA ATCAATTCAG TAAAGTCATG CAGCAGAGCT TTGCTGAATT GCCCGGAAAT
GCAATATCAT ACAGGATGAG GCCAGGGTTA AGCACTATAT TTAAGACAGA GGAAAAACTT
GGGGATTATG CTGATGTCAA ACAAGGATTA TCTACCGCTG ACAATGACCG CTTTCTGAAA
CTTTGGCATG AGATAAATAT TCATAAAATC AGTTTACAAG GTAAAGCGGA AAGAAAATGG
GTTCCTTGTA CAAAAGGGGG CTCATTTCAA AAGTGGTATG GAAATAATGA GTATGTGATT
AACTGGGAAA ATAATGGTTA TGAGTTAAAG CACTTCTTTG ACAAAAACAC CAAAAAACTG
CGCTCAGCAA TTAGAAATGA AATATACTAT TTTCGAAAGG GTATCACTTG GTCAGTAATG
AGCAGTGGTA GTAACGGGTT CAGAATTCTA CCAGAAGGGT TTATTTTTGA GCACAAAGGC
TCTGCTTGTT TTGCTAAGGA TGAATCCGAT CTGGAGTCAA TAATTGGTTT CTTAAACTCC
CCGGTTGCTT ATAGTCTCAA TCAGGCTCTC TCATCAGGCA ATGAAATTAA AGAGGGAATT
CTTCAAAAAT TGCCGTACAA AGAGCCATAT AATGCAACTA AGATTAGCCC AATAGTCCAA
TCCTGCACCA ACATCGCCCG CTTAGATTGG GATAGCCGAG AAACGAGTTG GGATTTTGCC
GAAAATCCAC TGGTTGCCAT TCAGCGGCAG GCATCGGGTT CATTACGGCA GGCTTACGAA
ACCTGGGCCG CGCAGGTAGC CGGGCAGTTT GTTGAGCTGC ATCGGCATGA GGAGCGGCTA
AACCATATCT TCATTGACTT GTATGGATTA CAGGATGAGT TAACGCCCGA AGTATCGCCC
CGCAATATTA CCCTCCTGCC CGAGGAGCTG GACAAAAACC AGCTAATGGC GGAAGCTGAA
AGAGAAGACA ACTGGCTTAT AAACCCAACA GGTGTTGTAA CTAGCGCCAT CCGGCGCGAT
GTAGTGGCTC GGCAGTTTAT CAGCTATGCC GTGGGCTTGC TCATGGGCCG CTACCGGCTC
GACAGCCCTG GTCTACACAT CGCCCACCCA AATGCCACGC CCGAAGAACT GGCAGACTAT
ACCGTGACGC GAACGGAAAA CGGAATACCA AAAACCGAGC CCTTCACCAT CGACCCCGAT
GGCATTTTGC CAATACTGGG TGAGGAAGGT GGTTTTCCTG ATGACCTGGG ACGTGGGCTT
CGGCAGATAC TCGAATTGAT TTGGGGTGGT CACCAACTCA CCGACACGGT AAGCTGGCTG
GAAGAGTCGC TTGGGCAATC GCTCGACAAG TATCTGACTT TTAATTTTTG GGGCGATCAT
TGCCGACTCT ACCAGAAACG ACCCATTTAC TGGTTGTTTT CATCACCTAA GGGCGCATTT
AAGGCCCTAG TTTATCTGCA CCGCATAAAT GGATTCACGG TATCCACACT CCGTAACAAG
TATTTGTTGC CATATATTGA CCGGCTCAGT CGCCAGATCG ACCACTTTAA TTCAACCAAA
AGTCAACTCG GTACCGCCGA AAATCGACGC ATTGAAACCT TACGCAAGGC ATATGAAGAG
TGCCGCCAGT ATGATTTGCT ATTACGCGAT GCCGCTGACC GCCAGTTTGT GCCCGATCTC
GATGCTGGTG TGACGCGTAA CTATGCGCAG TTGAGCAAGG TGCTGGCTAT CATTAAATAG
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| Protein sequence | MDTRRLKPFA QQCRQRLMQG IADRLNYWGF VATSRQPVET LEKLDGGYLF RGQVFDETDV
PRRWQLLAGA VQTHGFAHVQ ETVAYTWFNR LMALKILAHN NYQPDVLSFT RPDTPTPQLL
DEARRAQPPY LSEQLYRILR PLLTDYTRET DAFARLLTAY CVQHPVLHRL FDVADDVSTL
LLPADMLGES GVLAFINNST AISEADFKQV ELIGWLYQFY IADRKDEVFA GFKKGLKAGP
DDIPAATQIF TPRWIVSYLV ENTLGRLYLD QNPDSSLGET MRYLVKTEKK PTTVADETGQ
SREAAPTTLS FNEGALPMQA DVSVASLRLI DPACGSGHIL VTAFDLLMRI YNEEGYTKRQ
AVTAILNSHL VGLDLDERAA QLSRFALLLK ASQYWPGVWD TDIIPDVWAM PDPWMPTDTD
LLSFLGTDGR EFLAELHTAL RLMQQSQNLG SVMRPNLSRA GRTHLRNRLL IYEAQSDDAI
DIFAGTNRQH LRHYIHVLLI LTDHYAAVAA NPPYINSGSM EAVLKGYIEK HYYRSKINLS
LSFMEKCCDM CQSKGIWGLI NQDSWLLKTS SVELRKLLLD TNAVESVLHL GPNAFDELGG
EVVQTTAATF RKSESHPSSS GIYYDLTMFG SSAKKEGAFL AGVNQFSKVM QQSFAELPGN
AISYRMRPGL STIFKTEEKL GDYADVKQGL STADNDRFLK LWHEINIHKI SLQGKAERKW
VPCTKGGSFQ KWYGNNEYVI NWENNGYELK HFFDKNTKKL RSAIRNEIYY FRKGITWSVM
SSGSNGFRIL PEGFIFEHKG SACFAKDESD LESIIGFLNS PVAYSLNQAL SSGNEIKEGI
LQKLPYKEPY NATKISPIVQ SCTNIARLDW DSRETSWDFA ENPLVAIQRQ ASGSLRQAYE
TWAAQVAGQF VELHRHEERL NHIFIDLYGL QDELTPEVSP RNITLLPEEL DKNQLMAEAE
REDNWLINPT GVVTSAIRRD VVARQFISYA VGLLMGRYRL DSPGLHIAHP NATPEELADY
TVTRTENGIP KTEPFTIDPD GILPILGEEG GFPDDLGRGL RQILELIWGG HQLTDTVSWL
EESLGQSLDK YLTFNFWGDH CRLYQKRPIY WLFSSPKGAF KALVYLHRIN GFTVSTLRNK
YLLPYIDRLS RQIDHFNSTK SQLGTAENRR IETLRKAYEE CRQYDLLLRD AADRQFVPDL
DAGVTRNYAQ LSKVLAIIK
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