Gene Slin_4844 details

Gene Information

• Locus tag: Slin_4844
• ID: 8728608
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Spirosoma linguale DSM 74
• Kingdom: Bacteria
• Replicon accession: NC_013730
• Strand: +
• Start bp: 5894993
• End bp: 5898553
• Gene Length: 3561 bp
• Protein Length: 1186 aa
• Translation table: 11
• GC content: 49%
• Product: hypothetical protein
• Protein accession: YP_003389621
• Protein GI: 284039691

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000657531
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: 26
• Fosmid unclonability p-value: 0.281651
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTTAACAA CGATTAAAGA AATTTTCGAA AAATCCATTG ATCGTCGGAT CAATCCGGCG 
GTAGTTGTCG ACAATACCGA CCCGGAGACT ATTACGACGG AAATCGATGA ATATGTGTTT 
ACCGCCAGTT TAACCGAACA GCTTTACAAA CTGCTGAACA CTCTTGGTAG TAAGGCCCAG 
ATTAAAACGG GTATTTGGAT CAATGGCTAC TACGGGTCTG GTAAATCGCA CTTTCTAAAG 
TTTTTTTCTT ATTGCCTGAG TGATCAAAAT CAGGAGCGGG CTTTCAGGCG TCTGATCAAT 
GAAGGTATTG CTCCCCTGAG CAAAGAAAGG CCCCTGACCG ATGCAACACC GGCTAACGCG 
GAAAACCTGT TGAGTCGACT GCGGGGGTCT GGTACGGAGG TTATCATGTT CAATGTAGAA 
GCGGTTTCGC CTGATAATAT AAAGAGCGAA GACAAGTTTC TACATATGCT GCTCAAGCAA 
TTTAACAAAC ACCGTGGCCT CAACAGTACA AACATTCCAT TGGCGCTGCT GCTGGAAAAT 
CATTTGCAAC AGAGCGGCTT GTTTGATCAA TTCATTCAGG CAGTTGAGTC GAAGTACCGC 
AAAAGCTGGC GGGACAAAGC CACGGACTTA TTTTCGTTAT ACGGTATCAA CATCGTACGG 
CTGGCCGCTG AGGTGGACCC TTCACTCGAC GCCGACATGC TCTTCCAGAA ACTCAAGCAA 
CCTGATGCCG TTACCATTGA GGATACGCTT ATTCCGGAAC TAAGGGCCTA TATTCAAACC 
AAACCCGCCA ATTACCGACT GGTGTTTCTA CTCGATGAAG TCTCGCAATA CATTGGGCGC 
AATAAAGACT TGTTGCTCAA CCTGCAAACC ATCATTGAGG CCTTGGAAAA AGCCTGTAAC 
CGGCAAGTGT GGGTAGCCTG TACAGCGCAG CAGACCCTCG AAGAGGTAAC CAGTACGGCT 
CAGGTAACCA AAGAAGACGA GATTGGTAAA ATTCTGGGTC GGTTTGAAAC CCGTATTGCC 
TTAGACAATA AAGACGCTGA GTTTATTACC CAAAAACGGG TGCTGGACAA AAGCATTGAC 
GGTCAACAGG ATTTACAGCA ACGGTACCGC CAGCACGCCC ACGCCATTCT GAACCAGTTC 
CAGTTTGGTA ATAATACAAC TTACCGGGGT TTTGGTGATG AGGATGAGTT TGTGCGTATG 
TATCCGTTTG TGCCTTACCA GTTCCCCCTT ATCCTGAACG TTTTCGACTC CTTTAGCCAA 
AAGGGATACG TCGTTCGTGA AGTCAAAAAT AATGAGCGGT CGGTATTGGG AATTACCCAT 
GCCACGATCC AAAACTTTGC GGATGAGCCA ATTGGTGGTT TTGTGCCGTT CGATGCATTT 
TTTAATGACT TATTTCGCAA TAACCTGCTC CAGGTGGCTC AACAGAGTAT TTACCGGGCC 
GAACAGGTTA TTGACCGGTC AGGGGAGCGG CTCTCAGATC TACGTTTTGC CAAACGTGTT 
CTACGGGCAT TATTTATGCT GGCGAATCTG AACAGCAGTG AATCCCGTCG TTTTCCGGCT 
ACGCGTGAGC AATTGGTTAC CCTGCTCATG ACTGGGCTTG ACGATAACCG GCTGCAGCTA 
GCCAACCGAA CGCAGGACGT GCTGGATGTG CTGATTGCCG AAAATATTAT TTACCTGAAC 
GACGACGCCC ACTTTGCTTT TTATAAAGAG GAAGAGATTG AGGTAGCCAA TCAAATTCGG 
CGAACCAATG TACTGGAACT TGACCGCCTG GATAACTGGA ATGACGTGTT TCTCAAATCA 
TTGGGGCTGA ATAAAGAAAC TCGCTACACG TTTGGAAAGA ACACGTTTCG GCTGGGTTAT 
GGCGTAGATC GCAAAGACTA TGGTAACACG GGTGATATTC AGGTGCGGTT CTTTGTCATG 
GACGGTACTG ATGCCGCCAC GCTGGCCCTC AATCAGCCCG CTCATGAACT AGCCGTTTGC 
ATTAGCGCCT GGCTCAATGA TCCGTCGAAT ACCGACAACG ATTTTAGCCG GGATGTTGAA 
AATTATATTC GTACCCGCAA ATACCTGGGC TTGTATTATA CGGCATCGAC CGGGTCAATG 
GCTGATACGT TGCGGGATTT TGAAAAGCGA AATGCCGCAC TGCTGCAATC GCTTACCACC 
CGGCTCAAAA CAGGCTTTGC TTCGATCCCT ATGTATGCCG GGCAACAACG GATCGACCCC 
GCTGGCTTAT CGGGTAACCA GCCCGACGTT CGCCTGAAGG GTGCCATCGA GAAGCTGTTC 
AATGTTGTAT TTAAGTACCA GACCGATGTG AACAGCTATG CCCATACCAA TGATGGGTTG 
CGTGAGAATG CACGCAATAC CGGGCAGCTT AGTACCGATA CCACATTGAC AGCGGCCGAA 
CAACGCGTTG AGGATTGGAT TAATAACCGG GGAGGTAAAG CAACCGTTGC CGATGTCGTG 
AAGGCGTTTG AAGATCGACC CTTTGGCTGG AAAGACTTAG CCACTATTGA TGTTCTCCTG 
GGGCTTGTTG CCAAGAAAAG GAAGGAAATT GAGTACCAAA ATAGCCCACT CAGTGCGCCG 
ACTGAGTTTG TTGAGAAAGC GATCAAAACC TCGGAACGTA CAGCGCTGCT GGTGCGTACC 
ACAGAAGACA TTGCTCCGCA ATTGATTCAG CATGCTATAC GGGCTTATGG TCAGGTATTT 
AACAAAACGC TGAATCTGGC CCCCGATCCT ACGGCTGTGC AGGGGGCTAT CAAAACGGAA 
TTGAGTCGTG AAATCGACCG ACTGGCTCCG TTAACCACCA TCCATGCTGC TTTGCCATTT 
GCGCCCGCGT TGACTCAGTT GGTTGACTCC CTGCGGGCCG TTGGCCTGAA ACGGGATGCC 
AAGATGCTGT TTGAAACACT CGTGGCTCAG GCGAATGAGT TGCGGAAACA GTGCGATGCC 
GCCAAAGAAC TGGATGCGTT CATTACCGAC CGACTCGATG AATACGTCGA TATGCGCCAG 
TATGTGTTGA CCCAGAAAGG CAACTTCAGT GCGCTACCTG AGCAGGAAGC CCGACAAGCC 
CGCGATCTCT ACGACGATCT ACTCAACAAC CCTACGCCCC AGGAAGCATT CGCCCTGAAC 
CGGAAACGGT TCCTGGCCGT AAAACGAGCG ATTGGCGACT CGGTAACCAC CTTGCGCCAA 
ACCGTTAGGA AGGCTTATGA AACGGCCTTT GACGAACTGG ACGCCTACCG GGTAGAACAT 
GGCCATGATG ACCCGCATAC CCTTGCCGAC CGAGATCAGA CATTGCTCAG TATTGATAAA 
CTGAATAACC TGACCGAACT GGACTTAAAA CTGGCACGCG TGGGCGATTT TAAGGCCGAA 
CAACTACGCG TTCTTATTCA AGCAACCAAC AAAAAAGCTG CCCCCGGTAG TTTGGTACGT 
GAACCGGTTA TGTTTGAATA TGGGAAACAA ATGCTACCAA CCCAGATCGC ATCTGAAACC 
GAACTCGATC AATACTTAGC GCAGTTGCGA CACTTGTTGA AAGCACAGCT AGACCAAAAT 
AAGGTTGTTA TTTTTAACTA A 

 

Protein sequence

MLTTIKEIFE KSIDRRINPA VVVDNTDPET ITTEIDEYVF TASLTEQLYK LLNTLGSKAQ 
IKTGIWINGY YGSGKSHFLK FFSYCLSDQN QERAFRRLIN EGIAPLSKER PLTDATPANA 
ENLLSRLRGS GTEVIMFNVE AVSPDNIKSE DKFLHMLLKQ FNKHRGLNST NIPLALLLEN 
HLQQSGLFDQ FIQAVESKYR KSWRDKATDL FSLYGINIVR LAAEVDPSLD ADMLFQKLKQ 
PDAVTIEDTL IPELRAYIQT KPANYRLVFL LDEVSQYIGR NKDLLLNLQT IIEALEKACN 
RQVWVACTAQ QTLEEVTSTA QVTKEDEIGK ILGRFETRIA LDNKDAEFIT QKRVLDKSID 
GQQDLQQRYR QHAHAILNQF QFGNNTTYRG FGDEDEFVRM YPFVPYQFPL ILNVFDSFSQ 
KGYVVREVKN NERSVLGITH ATIQNFADEP IGGFVPFDAF FNDLFRNNLL QVAQQSIYRA 
EQVIDRSGER LSDLRFAKRV LRALFMLANL NSSESRRFPA TREQLVTLLM TGLDDNRLQL 
ANRTQDVLDV LIAENIIYLN DDAHFAFYKE EEIEVANQIR RTNVLELDRL DNWNDVFLKS 
LGLNKETRYT FGKNTFRLGY GVDRKDYGNT GDIQVRFFVM DGTDAATLAL NQPAHELAVC 
ISAWLNDPSN TDNDFSRDVE NYIRTRKYLG LYYTASTGSM ADTLRDFEKR NAALLQSLTT 
RLKTGFASIP MYAGQQRIDP AGLSGNQPDV RLKGAIEKLF NVVFKYQTDV NSYAHTNDGL 
RENARNTGQL STDTTLTAAE QRVEDWINNR GGKATVADVV KAFEDRPFGW KDLATIDVLL 
GLVAKKRKEI EYQNSPLSAP TEFVEKAIKT SERTALLVRT TEDIAPQLIQ HAIRAYGQVF 
NKTLNLAPDP TAVQGAIKTE LSREIDRLAP LTTIHAALPF APALTQLVDS LRAVGLKRDA 
KMLFETLVAQ ANELRKQCDA AKELDAFITD RLDEYVDMRQ YVLTQKGNFS ALPEQEARQA 
RDLYDDLLNN PTPQEAFALN RKRFLAVKRA IGDSVTTLRQ TVRKAYETAF DELDAYRVEH 
GHDDPHTLAD RDQTLLSIDK LNNLTELDLK LARVGDFKAE QLRVLIQATN KKAAPGSLVR 
EPVMFEYGKQ MLPTQIASET ELDQYLAQLR HLLKAQLDQN KVVIFN