Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4791 |
Symbol | |
ID | 8728555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5840152 |
End bp | 5843496 |
Gene Length | 3345 bp |
Protein Length | 1114 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | trehalose synthase |
Protein accession | YP_003389568 |
Protein GI | 284039638 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0872883 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAACG AAAGCGTAGA ACAACTGGAT AATCTCCGCT GGTATAAAGA TGCCATCATC TATGAATTGC ACATCAAAGC GTTTTGTGAT GGTAATGGCG ATGGCATTGG TGATTTTCAG GGCTTACTCG AAAAGCTGGA TTATTTGCAG GAACTGGGCG TAACGGCCAT TTGGCTGCTG CCTTTTTACC CGTCGCCCCT GCGCGATGAT GGATACGATA TTGCCGACTA TTACACCATT AACCCGTCGT ATGGCACCAT CGAGCAGTTT AAAACGCTCC TTCGGGAAGC GCACCAGCGT AATCTGAAAG TAATTACCGA GCTGGTTATC AATCACTCAT CCGACCAGCA CCCGTGGTTT CAGCGTGCCC GACGTGCACC CAAAGGCTCG CCCGAACGGG AGTACTATGT CTGGACCGAC GACCCGACGC AGTTCAAGGA TGTACGTATC ATTTTTCAGG ATTTCGAAAC CTCTAACTGG ACCTGGGATC AGGAAGCGCA GCAGTATTAC TGGCACCGCT TTTTCCACCA CCAGCCCGAC CTTAATTACG ACAATCCGCT GGTGCAGGAC GAGGTGTTCA AAATGATTGA TTACTGGTGC GAACTGGGCG TGGATGGGTT TCGGCTCGAT GCCGTTCCTT ACCTGTTTGA GCGGGAAGGG ACCAACGGCG AAAACCTGCC CGAAACACAT GCCTTCCTCA AAAAACTGCG TAAACACGTC GACGATCATT TCCCGGGCGT CGTCTTTCTG GCCGAAGCCA ATATGTGGCC CGAGGATTCG GCGTCGTACT TCGGCGATGG CGACGAGTGC CACATGAACT ACCATTTTCC GGTCATGCCG CGTATGTTCA TGTCGCTGCA AATGGAAGAC CGGTATCCCA TTACCGACAT TTTCGATCAG ACGCCCGCCA TTCCAGACAG CTGCCAGTGG GCTATTTTCC TGCGCAACCA CGATGAGCTG ACCCTCGAAA TGGTGACCGA CGAAGAGCGG GATTATATGT ACAAGACGTA CGCCAAAGAC CCGAAAGCGA AGATTAACCT CGGCATCCGG CACCGGCTGG CACCGCTCAT GGGTAACAAC CGGAAGCGGA TCGAACTGCT GAATAGTCTG CTGTTTTCGC TACCCGGCAC GCCCGTCATC TACTACGGCG ACGAGATCGG CATGGGCGAC AACGTGTATC TGGGCGACCG GGACGGCGTG CGAACACCCA TGCAGTGGTC GCCGGACCGC AATGCGGGTT TCTCGACAAC TAATCCGCAA AAACTCTACC TGCCCACTAT TCTCGACCCG GAATACCACT ATGAGGCCGT AAACGTCGAA AACCAGCGCG GCAATACCTC GTCGTTGTTC TGGTTCATGA AGCGGATGAT CAACCTGCGC AAACAGTACA AGGCGTTTGG GCGGGGCGAC ATGAAATTCC TGAACGTCGA AAACCCGAAA GTACTGGCCT TTACCCGAAC CTACGAAGAC CAGACGCTGC TCATCGTGGT GAATCTGTCG AAGTACGCGC AACCGGCAGA GGTGGAGTTG AGCGGTTTTT CGGGCTATGT GCCGGTGGAA GCGTTCAGCA AGAACCCCTT TCCGACGATT TCTAACACCG AAACGTATTT CTTTACCCTG GCTCCGCACG ATTACCAGTG GTTTGTGCTT GAAAAAGCGG CTTCCGAAGC GGCCCGCGTG TTCCAGCTGC CCGGCGTTCG TGTCAACGAC TGGAATGAGT TAATGAGCCA GAACACGCGC ATGATGCTGG AAACGAAAGT GCTGCCGGAC TATCTCCTCC GGGTAGACTG GTTCGATGAT AAAAAGCAGA CCATGCGTGG GGTGTCCATT TTGCGGAACG GTATACTGCC GCTGGCGGAT AGCACGGCCT ATGTGCTGCT GCTTGAGGTG TCGTACGAGC GGGGCCTGCC CGAGTTGTTT CAACTGGTGG TTGCCTTTGC TAAAGAAGCA TCGGCCGAAA AACTGATCGC CAATTGCCCG CAGGCCGTGC TGGCCAACAT GGAAGTTGGC GACGCGTCCG GCGTTCTCTG CGACGGTATC TATCTGACCG ATGTTCAGTT GGCTTTACTG CAGAACATGA GTGGGCCGAA ACAAAGTGGG GTGCGTAATC TGGAGTTCCA GCATACGCCA AAGTTCGACG AGTACGTGCG CAACCACAGT GAGGTAAAGC CCAAACTGAT GCCCGTCAAT CCCGGCTATG TGTCCATCAG CTACGACCAG TGCTATCTGC TGAAGCTGTA TCGGCAGGTA GAAATGTCGG TCAACCCCGA CACCGAACTC ACGCGCTTCC TGTCTGAAAC GGCCAATTTC GAATACGTAC CTGCCTTTGC CGGGTCTATT GAACTGAGCA CGACCGAAAA ACCCGTTATG CTGGGCACCA TGCAGGAGCT GGTAGCCAGT CATGGCGATG GAAAACGGTA TGTGCTGGAG CGGATCAATA ATTTCATCGA ACGGATTCTT GCCCGCAATA AAACCCAGCT GGCTGCGGCC ATGAATGTGC CGGTCGGTAG CCTGAGCAAC CCCATCCCGT TTGAGGATTT GCCTGTCGAG ACAAGAGAGT TGATCGGTCA GCGGTCGGCC GATCAGTCAC GCTTACTGGG CACCCGCATC GGACAAATGC ACCTGGCGCT GGCATCCAGC AAAAACCTGA AAGAGTTTGC GCCGGAAGAG TTCTCCCTGC ACTACCAGCG GTCGCTTTTC TCGGGCTTAC AGTCGCTGGT ACGGGAAAGT TACCAGACGC AGAAACGGAA CGTGCAGCGG CTTCCGGAGG GCGTACGGCA GGAGGTAGAA CAAATGCTGG AACGGAAAGA GGACGTGCTG AATACCCTCA AACGGATTTA TGACCATAAG CTGGAAACCA CGAAAATCCG GAGTCATGGT GATTTGCAAC TGGAAAAAAT CCTGCTCACC GGGAAGGATC TTGCTATTCA GGATTTCGGT GGTGACCCCA GCCGGAGTTA TAGCGAACGT CGGCTGAAGC GGTCGCCCCT GCGCGATGTG GCGGCCATGA TTCGCTCGTT CTATTACGTA GGTTATCAGG GCTTTCTGGA AAACAATCAG GTGCCTAAAG AAGAGACGGT GAAGCTGTTG CCGTATGCCG GATTCTGGGC GCATTACATG AGCAGTTTCT TCATGAAGGC CTATCTGGAA ACGGTTCAGG GCAGTTCGTT CATCCCGAAA AACACCGACG ACCTGCAAAT GATGCTCGAA ACATACCTGC TCGAAAAGGC TATTTCAGAC TTCAACCACG AGCTGAACTA CCGACCCGAC TGGGTGCATG TGCCGCTGCA AATTATTAAG TCTATCGTTG TTTCGCCCGA AGTCGCCGTG CCGGAACTGG CGTAG
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Protein sequence | MMNESVEQLD NLRWYKDAII YELHIKAFCD GNGDGIGDFQ GLLEKLDYLQ ELGVTAIWLL PFYPSPLRDD GYDIADYYTI NPSYGTIEQF KTLLREAHQR NLKVITELVI NHSSDQHPWF QRARRAPKGS PEREYYVWTD DPTQFKDVRI IFQDFETSNW TWDQEAQQYY WHRFFHHQPD LNYDNPLVQD EVFKMIDYWC ELGVDGFRLD AVPYLFEREG TNGENLPETH AFLKKLRKHV DDHFPGVVFL AEANMWPEDS ASYFGDGDEC HMNYHFPVMP RMFMSLQMED RYPITDIFDQ TPAIPDSCQW AIFLRNHDEL TLEMVTDEER DYMYKTYAKD PKAKINLGIR HRLAPLMGNN RKRIELLNSL LFSLPGTPVI YYGDEIGMGD NVYLGDRDGV RTPMQWSPDR NAGFSTTNPQ KLYLPTILDP EYHYEAVNVE NQRGNTSSLF WFMKRMINLR KQYKAFGRGD MKFLNVENPK VLAFTRTYED QTLLIVVNLS KYAQPAEVEL SGFSGYVPVE AFSKNPFPTI SNTETYFFTL APHDYQWFVL EKAASEAARV FQLPGVRVND WNELMSQNTR MMLETKVLPD YLLRVDWFDD KKQTMRGVSI LRNGILPLAD STAYVLLLEV SYERGLPELF QLVVAFAKEA SAEKLIANCP QAVLANMEVG DASGVLCDGI YLTDVQLALL QNMSGPKQSG VRNLEFQHTP KFDEYVRNHS EVKPKLMPVN PGYVSISYDQ CYLLKLYRQV EMSVNPDTEL TRFLSETANF EYVPAFAGSI ELSTTEKPVM LGTMQELVAS HGDGKRYVLE RINNFIERIL ARNKTQLAAA MNVPVGSLSN PIPFEDLPVE TRELIGQRSA DQSRLLGTRI GQMHLALASS KNLKEFAPEE FSLHYQRSLF SGLQSLVRES YQTQKRNVQR LPEGVRQEVE QMLERKEDVL NTLKRIYDHK LETTKIRSHG DLQLEKILLT GKDLAIQDFG GDPSRSYSER RLKRSPLRDV AAMIRSFYYV GYQGFLENNQ VPKEETVKLL PYAGFWAHYM SSFFMKAYLE TVQGSSFIPK NTDDLQMMLE TYLLEKAISD FNHELNYRPD WVHVPLQIIK SIVVSPEVAV PELA
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