Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4740 |
Symbol | |
ID | 8728504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5775615 |
End bp | 5776823 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | phospho-N-acetylmuramoyl-pentapeptide- transferase |
Protein accession | YP_003389517 |
Protein GI | 284039587 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000637951 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTCTATT ACCTCTTCCA GTTTCTTGAC GAACGCTATA ACTTTCCCGG CGCGGGGGTT TTCCAGTACA TCTCCTTCCG GGCGCTGGGT GCCGTAATCA CGTCGCTTCT GATCGCAGCC ATCTTCGGGC GACGCATTAT CGACACCCTG CGAAACCTTC AGATTGGCGA GTCGATCCGC GATTTGGGGC TGGAAGGGCA AATGCAGAAA CGAGGGACCC CAACCATGGG CGGATTTATC ATTCTGGCCT CCCTGCTGAT TCCGGCGCTG CTCTTTGCGA AACTAACAAA TGTCTACGTC GTGCTGGCGC TGGTATCTAC CGTCTGGACC GGCATGATCG GCTTTCTGGA CGACTACATT AAAGTATTCA AGAAAAACAA AGAGGGCCTG GAGGGGAAGT TTAAAGTAGT TGGACAAGTG GGTCTGGGCC TTATTGTCGG GCTAACGCTG TACTTCAACG ACTACGTAAA GATCAGGAAG TACGCTCCCC GCCTGTTCAG CACCTCGAAT GTGCCAGATG TGTACACCGA TATTAAGTCG ACGCTCACCA CGGTGCCCTT CGTCAAAAAC AACGAGTTCG ACTATAGCTC GTTGCTGTTC GGGTTTCTAC CGGATAGTTA CACCTGGATT ATCTATGTGC TGATCTGTAT TTTTATCATC ACGGCCGTTT CCAACGGGGC AAACATTACC GACGGCATCG ACGGTCTGGC GGCTGGTACG TCCGTCATTA TCGGCCTAAC CATTGGCGTA CTGGCTTATT TATCGGGTAA CAAGGTTTTC TCGCAGTACC TGAACATCAT GTACATTCCG AATGCCGGTG AGCTGGTAAT TTTCTGCGCG GCTTTTGTGG GGGCCTGCGT TGGCTTTCTC TGGTACAACT CCTACCCGGC GCAGGTATTC ATGGGCGACA CGGGTAGTTT AATGTTAGGG GGCGTAATTG CGGTGTTGTT TCTGGCGATC CGAAAGGAGT TGATGATTCC GATCATCTGC GGCATTTTCC TGGTCGAGCT GGTCTCCGTC ATTATGCAGG TCAGCTATTT TAAATACACC AAACGAAAGT ATGGCGAGGG TAGGCGAATT TTCCTGATGT CGCCCCTGCA CCACCATTTT CAGAAGAAAG GCTACCACGA AGCCAAGCTC GTTACGCGCT TCTGGATCGT CGGCATTATC CTGGCGGTAC TGGCTTTAGC CACGCTGAAG CTGCGGTAA
|
Protein sequence | MLYYLFQFLD ERYNFPGAGV FQYISFRALG AVITSLLIAA IFGRRIIDTL RNLQIGESIR DLGLEGQMQK RGTPTMGGFI ILASLLIPAL LFAKLTNVYV VLALVSTVWT GMIGFLDDYI KVFKKNKEGL EGKFKVVGQV GLGLIVGLTL YFNDYVKIRK YAPRLFSTSN VPDVYTDIKS TLTTVPFVKN NEFDYSSLLF GFLPDSYTWI IYVLICIFII TAVSNGANIT DGIDGLAAGT SVIIGLTIGV LAYLSGNKVF SQYLNIMYIP NAGELVIFCA AFVGACVGFL WYNSYPAQVF MGDTGSLMLG GVIAVLFLAI RKELMIPIIC GIFLVELVSV IMQVSYFKYT KRKYGEGRRI FLMSPLHHHF QKKGYHEAKL VTRFWIVGII LAVLALATLK LR
|
| |