Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4730 |
Symbol | |
ID | 8728494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5760484 |
End bp | 5761920 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | Curli production assembly/transport component CsgG |
Protein accession | YP_003389507 |
Protein GI | 284039577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.509697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTCT ACCGATCAGT GATTACCTAT TCCCGAATTA TACCCTTTAG TTGCCTGTGG GTTTTATCAG GCTGCGCTGC CTACCTCCAC CAGCCCACCG GATTGCAACG AGCCCGGCTG GGCGAAGAAA CCACCACCAC AGCCGCCTTG CGAAACCTAC CCAAGGCCAA AGAAAAAGTG GTCGTTGCTG TTTATAAATT CAGAGATCAG ACTGGCCAAT ATAAGTTATC GGAAACCGGC TCCACCTTTT CAACTGTAGT CTCGCAGGGA ACCACCAACA TCCTGCTCAA AGCCCTTGAA GAAAGCGGCT GGTTCACCAC CATCGAGCGG GAAAACGTCA GTAACCTGTT GAACGAACGG AAAATTATCC GTTCCAGCGT GGCTCAGTAT AAAGAGGGAG AGAATCTTCC ACCCCTACTT TTTGCCGGTG TTATTCTGGA AGGAGGCATT GTTTCCTACG ATGCCAATAT CATCACGGGC GGGGCTGGCT TACGGTATTT TGCAACGGGT GGATCGACCC AATACCGTCA GGACCGGGTA ACGGTTTACT TACGGGCAGT GGCCACTCGC TCGGGCAAAA TCCTGAAAAC GGTTTATACC TCCAAAACGA TTCTTTCCCA GTCGGTCGAT GCCGGTATTT TTCGGTACGT CACCTTCAAA AAACTACTGG AAGCAGAAAC CGGCTTTTCG ACAAACGAAC CTTCGCAGAT GGCCGTTACG GAAGCGATTG AAAAAGCCGT TCAGGCCTTA GTACTGGAAG GTATTCAGGA TGGGCTTTGG GCGGTGTCTG ACAAAGACAC TGGGGTGGCC AAACGTGAGC TGGATCGCTA CGATGCCGAA AAGGTGAACA TGAGTCAAAC GGACGTGTAT GGCGTGCAAT CGCCCCAGAT CAGAACACCC TCTCGATTCA CTGTTCAACC ATACGCATCC GTATGGCGTT TTTCCGGCGA TTATGCAGGC AGTGTGATCC GGCCCGCTTA TGGCCTGACC GTTGATCTGT ACCTGAAACC AGCCTGGGGA CTTCAGGTAA ATGCCGGTAA TGGTACGCTG GCCTGTGGCC AAGGATTTTC GGGTAACTTC ACACTGCTCA ACGGCAACAT TGTCTGGCGC AGCTTGCCCT ACCAGCGCTT TTCGCCCATT CTCACGTTGG GAGGAGGAGT CCTGTATAAC CGCAACGCTA ATGACGTATT TCGCGTTGCA GGCCTACTAC ATGCCACCAT CAATGCCGGT ATCGGATGTC AATACGCTCC CAACGGCATC TGGGGATTCC GGTCTATGCT CAACTACCAC CAGTCGTTAA ACGATCAGGT TGACGGACTG CGGGCGGGGC AATTCAATGA TTTTGTTCTA CAAGCATCGT TTGGAGTAAC CCTTTCAATT GGACACTTAC GCCAGAGCCA GCCAACAGCT CAAAAAAAAC GAGTAAAGAG TAAGTAA
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Protein sequence | MKFYRSVITY SRIIPFSCLW VLSGCAAYLH QPTGLQRARL GEETTTTAAL RNLPKAKEKV VVAVYKFRDQ TGQYKLSETG STFSTVVSQG TTNILLKALE ESGWFTTIER ENVSNLLNER KIIRSSVAQY KEGENLPPLL FAGVILEGGI VSYDANIITG GAGLRYFATG GSTQYRQDRV TVYLRAVATR SGKILKTVYT SKTILSQSVD AGIFRYVTFK KLLEAETGFS TNEPSQMAVT EAIEKAVQAL VLEGIQDGLW AVSDKDTGVA KRELDRYDAE KVNMSQTDVY GVQSPQIRTP SRFTVQPYAS VWRFSGDYAG SVIRPAYGLT VDLYLKPAWG LQVNAGNGTL ACGQGFSGNF TLLNGNIVWR SLPYQRFSPI LTLGGGVLYN RNANDVFRVA GLLHATINAG IGCQYAPNGI WGFRSMLNYH QSLNDQVDGL RAGQFNDFVL QASFGVTLSI GHLRQSQPTA QKKRVKSK
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