Gene Slin_4730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4730 
Symbol 
ID8728494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5760484 
End bp5761920 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content51% 
IMG OID 
ProductCurli production assembly/transport component CsgG 
Protein accessionYP_003389507 
Protein GI284039577 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.509697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTCT ACCGATCAGT GATTACCTAT TCCCGAATTA TACCCTTTAG TTGCCTGTGG 
GTTTTATCAG GCTGCGCTGC CTACCTCCAC CAGCCCACCG GATTGCAACG AGCCCGGCTG
GGCGAAGAAA CCACCACCAC AGCCGCCTTG CGAAACCTAC CCAAGGCCAA AGAAAAAGTG
GTCGTTGCTG TTTATAAATT CAGAGATCAG ACTGGCCAAT ATAAGTTATC GGAAACCGGC
TCCACCTTTT CAACTGTAGT CTCGCAGGGA ACCACCAACA TCCTGCTCAA AGCCCTTGAA
GAAAGCGGCT GGTTCACCAC CATCGAGCGG GAAAACGTCA GTAACCTGTT GAACGAACGG
AAAATTATCC GTTCCAGCGT GGCTCAGTAT AAAGAGGGAG AGAATCTTCC ACCCCTACTT
TTTGCCGGTG TTATTCTGGA AGGAGGCATT GTTTCCTACG ATGCCAATAT CATCACGGGC
GGGGCTGGCT TACGGTATTT TGCAACGGGT GGATCGACCC AATACCGTCA GGACCGGGTA
ACGGTTTACT TACGGGCAGT GGCCACTCGC TCGGGCAAAA TCCTGAAAAC GGTTTATACC
TCCAAAACGA TTCTTTCCCA GTCGGTCGAT GCCGGTATTT TTCGGTACGT CACCTTCAAA
AAACTACTGG AAGCAGAAAC CGGCTTTTCG ACAAACGAAC CTTCGCAGAT GGCCGTTACG
GAAGCGATTG AAAAAGCCGT TCAGGCCTTA GTACTGGAAG GTATTCAGGA TGGGCTTTGG
GCGGTGTCTG ACAAAGACAC TGGGGTGGCC AAACGTGAGC TGGATCGCTA CGATGCCGAA
AAGGTGAACA TGAGTCAAAC GGACGTGTAT GGCGTGCAAT CGCCCCAGAT CAGAACACCC
TCTCGATTCA CTGTTCAACC ATACGCATCC GTATGGCGTT TTTCCGGCGA TTATGCAGGC
AGTGTGATCC GGCCCGCTTA TGGCCTGACC GTTGATCTGT ACCTGAAACC AGCCTGGGGA
CTTCAGGTAA ATGCCGGTAA TGGTACGCTG GCCTGTGGCC AAGGATTTTC GGGTAACTTC
ACACTGCTCA ACGGCAACAT TGTCTGGCGC AGCTTGCCCT ACCAGCGCTT TTCGCCCATT
CTCACGTTGG GAGGAGGAGT CCTGTATAAC CGCAACGCTA ATGACGTATT TCGCGTTGCA
GGCCTACTAC ATGCCACCAT CAATGCCGGT ATCGGATGTC AATACGCTCC CAACGGCATC
TGGGGATTCC GGTCTATGCT CAACTACCAC CAGTCGTTAA ACGATCAGGT TGACGGACTG
CGGGCGGGGC AATTCAATGA TTTTGTTCTA CAAGCATCGT TTGGAGTAAC CCTTTCAATT
GGACACTTAC GCCAGAGCCA GCCAACAGCT CAAAAAAAAC GAGTAAAGAG TAAGTAA
 
Protein sequence
MKFYRSVITY SRIIPFSCLW VLSGCAAYLH QPTGLQRARL GEETTTTAAL RNLPKAKEKV 
VVAVYKFRDQ TGQYKLSETG STFSTVVSQG TTNILLKALE ESGWFTTIER ENVSNLLNER
KIIRSSVAQY KEGENLPPLL FAGVILEGGI VSYDANIITG GAGLRYFATG GSTQYRQDRV
TVYLRAVATR SGKILKTVYT SKTILSQSVD AGIFRYVTFK KLLEAETGFS TNEPSQMAVT
EAIEKAVQAL VLEGIQDGLW AVSDKDTGVA KRELDRYDAE KVNMSQTDVY GVQSPQIRTP
SRFTVQPYAS VWRFSGDYAG SVIRPAYGLT VDLYLKPAWG LQVNAGNGTL ACGQGFSGNF
TLLNGNIVWR SLPYQRFSPI LTLGGGVLYN RNANDVFRVA GLLHATINAG IGCQYAPNGI
WGFRSMLNYH QSLNDQVDGL RAGQFNDFVL QASFGVTLSI GHLRQSQPTA QKKRVKSK