| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4726 |
|---|
| Symbol | |
|---|
| ID | 8728490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5757592 |
|---|
| End bp | 5758839 |
|---|
| Gene Length | 1248 bp |
|---|
| Protein Length | 415 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | |
|---|
| Product | Curlin associated repeat protein |
|---|
| Protein accession | YP_003389503 |
|---|
| Protein GI | 284039573 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG TACTAATTGC CAGCATTATG CTGACTTCAG TGAGCGTTGT GTCATACGCT
CAGTCGAATG TATCTACTCT GAATCAGATA GGAGTAGGTC AGGAAGCAGC CATTAACCAG
AAGGGATTGG GCCAAAATGC CACCATCAAC CAAACGGGCG ACAGGAATGC CCACAACTAT
GGTGTTGTTA CGCAGTCGGG CGGCCCTCAA ACCGCCACGA TCAATCAAAT AGGCGGTACC
ATAAACAGCT ACGTTAATAT ACAACAGACA GGCGAAACCG CTTCTGATCA AAGTTCAGCC
AATACGGCAA CGGTAACCCA GGAAGGTTTG GCAACGGCCT GGGAAACTTG GTCTCGTACT
TGGGTTCATG AAGCACGTCG CACTATTGAA GAAACACTCA GGACTTCATG GGGACAAGGA
GGAGCGGTTG ATGTGTATCA GTCTGGAAAA AGAAATTCGG TCACTGTTTC ACAGTCCGGT
GCTGAAACCA TTGGTGAGCT GGTTACAGTT AAACAGATCG GCAATGGCAA TAGTGGAGTT
ATTACCCAAA CAATTGTAGC GGATCATTTT TACTTCAGAG AAATAAATAG TGTAAAATTA
CGCCAAACTG GAGATAATAA TACCGCTACG TTAAGTCAAA TAGCGGCCGG AAACGATTAT
ATAAGTGTTG TTCAGACTGG CAATAACAAC AGTAGTACGG TTAGTCAAAC CGGAGCAGGA
GAGAACATCA GTGCAACTGT TACACAGACG GGGTCTTTCA ATTCAGCTAC GGTTAACCAA
AATCCAGCTG ATGGAGCAAC TACAAGGATT ACACAAACAG GCGACTATTT CAGCGCTACT
GTCACACAGA ATAGTAATAA TATCGCTGTG ATCGACCAGC GCAATTCAGG TCTAAGTGGC
AGTTCAGTCA CTGTTTTGCA GGATGGTAGC CGTAACTTAA CAAATATTAC TCAAGGCACG
GATGAACTCT CGGTTAATAA CGCCGTTGCC AACGTGACTC AAACCGGCGA TGACAACTCG
GTCAAGTTGT TTCAAACTGG TTCAGATCAG ACAGCTACTA TTTCTCAAAC CGGTAATGGG
AACAGATTAT TAGGTATAGA AGGTGAAACA TCTTTCGCGT CTCAATCTGG CGCAGGAAAC
ACCCTAACGC TTACCCAAAC GAATGAAATC GGTGGCCCTG GTAATCAGGC TTTCGTTAAT
CAGCAAGGCT ACGCCAACGC TGCCACTATT ACACAAAGAG CTCAATAA
|
|---|
| Protein sequence | MKTVLIASIM LTSVSVVSYA QSNVSTLNQI GVGQEAAINQ KGLGQNATIN QTGDRNAHNY
GVVTQSGGPQ TATINQIGGT INSYVNIQQT GETASDQSSA NTATVTQEGL ATAWETWSRT
WVHEARRTIE ETLRTSWGQG GAVDVYQSGK RNSVTVSQSG AETIGELVTV KQIGNGNSGV
ITQTIVADHF YFREINSVKL RQTGDNNTAT LSQIAAGNDY ISVVQTGNNN SSTVSQTGAG
ENISATVTQT GSFNSATVNQ NPADGATTRI TQTGDYFSAT VTQNSNNIAV IDQRNSGLSG
SSVTVLQDGS RNLTNITQGT DELSVNNAVA NVTQTGDDNS VKLFQTGSDQ TATISQTGNG
NRLLGIEGET SFASQSGAGN TLTLTQTNEI GGPGNQAFVN QQGYANAATI TQRAQ
|
|---|
| |