Gene Slin_4724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4724 
Symbol 
ID8728488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5755437 
End bp5756849 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389501 
Protein GI284039571 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTA TACTTCTTTC GGCCCTGCTA TTGACAGCGA TCACCAGCCA GGCCCAGACC 
AATACATCTG TGCTGAGCCA GACCGGCATC AGCCAGACCG CAACCGTTTT CCAACAGGGT
AGCGGTAACC AGCTTACGCT GAATCAGAAC ACCGGTACCG GCATAACGGC TAATATTGGT
AACGTGGCCA GTACCACCCA GGTGGGGGCC AGTACCAACG GAAGCACTAA CCAGGCCTTT
ATTCAACAAG TCAACGGCTC CTATTACAAT ACCGGCAACA TTCTACAGAC AGGCGGATCG
GGCAACGCAG CGACCATTGA GCAGGCCAAC AATGCCGGCG GAACCGGGCT TTATGGCATC
GGTAATGGCA ACACAGCCAG CATCAGCCAG ACGGGGGCCT ATAACACCGA TGTACTAATT
CGCCAGGTGG GCGGTGATCT GGGTGCCAGC CAGCAAAACA AGGCCACCAT TTCTCAGGTG
GGCAGCAAAA TGAGCACTAC CGGAGGCACG GTCATCGAGC AAGTTAACCA GTCGATTGCC
AATACGGCCA CCATTTCTCA AGGCGTACTA AGCACAGACG CAACTACTAA CACGGCTACA
TTACTACAGA ACAACAATAG CCAGCGTAAC ACGGCCACTA TCAGCCAGGA GAAATCCGGC
CAGACAGCCG ACTTACGGCA GACCGACGGC AGCAACGACA ACAGGGCCAG TATTGAGCAG
TTGGGAACCA ACGGATCGGC TACGCTTTAC CAGAGTAACC TGGCGAGTAA TAATACCGCC
AGCATTCTAC AAAGCGCCAC CAGCGCAGGT AGCCAGGCCA CTATTTATCA GACTAATACC
AGCACCTACA ATACGGCAAC TATCGATCAG GCATCGACAA ACAGCGCGGC TCTGATTAGT
CAGGACAATC AGGCCGCCAA TCAGGTAGCG ACCATCGGGC AGGGAACGAA CGGTAATAAC
AACGTAGCCG CCATTACCCA GACCTATACC CATGCACTGG GAGACGATGC CACCAGCAAC
AGGGCCACCA TTAATCAAAA CCTGACCTCT TCGGGTAGTG TGGGCAACCA GGCCACCATT
ACGCAGGGCT TTTCGGAGGG CCAATCGACG GTAACGGGTA GGAAGGTTCC TTCTGACCTC
AACCAGGCAA CGATCAGCCA GGAAGGTGAC GCTCATGTGG CCAGCCTGAT GCAGGGTGGC
CTGAGTAACC AGGCCACCCT AACCCAGACG GGTACGGGTA ATGTAGTAAA AGGCGTTGAT
TCGGGTTCGA TTATTAGTGA TACCGCCCAG CAGTTAGGTG ATATGAACCT GTTAAACGTA
ATTCAGGGGG GATCGAGTGT AGCCAATGTA CTTCAGATCG GCACCGCCAA CATGGCGACA
ATCAGCCAAA ACAACGCCCA GAAACCTCAA TAA
 
Protein sequence
MNRILLSALL LTAITSQAQT NTSVLSQTGI SQTATVFQQG SGNQLTLNQN TGTGITANIG 
NVASTTQVGA STNGSTNQAF IQQVNGSYYN TGNILQTGGS GNAATIEQAN NAGGTGLYGI
GNGNTASISQ TGAYNTDVLI RQVGGDLGAS QQNKATISQV GSKMSTTGGT VIEQVNQSIA
NTATISQGVL STDATTNTAT LLQNNNSQRN TATISQEKSG QTADLRQTDG SNDNRASIEQ
LGTNGSATLY QSNLASNNTA SILQSATSAG SQATIYQTNT STYNTATIDQ ASTNSAALIS
QDNQAANQVA TIGQGTNGNN NVAAITQTYT HALGDDATSN RATINQNLTS SGSVGNQATI
TQGFSEGQST VTGRKVPSDL NQATISQEGD AHVASLMQGG LSNQATLTQT GTGNVVKGVD
SGSIISDTAQ QLGDMNLLNV IQGGSSVANV LQIGTANMAT ISQNNAQKPQ