| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4672 |
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| Symbol | |
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| ID | 8728436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5690576 |
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| End bp | 5693401 |
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| Gene Length | 2826 bp |
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| Protein Length | 941 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003389449 |
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| Protein GI | 284039519 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.612479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA TAATCGTATC ATTGTGTTTA AAATACGCTT TAGAAATGAC ATATAAACGT
TATACCCTTC AATCGTTCCG AACGACGGCC TTGCTCAGTG TAGGCGCCCT AGGCTTATGG
GCCTACTCGA CGAGGTCGTT CACCGCTCCC GGCGATAAAC CCGACGAAAA TCGGTTTACA
AAGGTAGTAC TTGCCGAAAA ACTAAATGAG CCGCTCGAAA TGGCCATTCT ACCCGACGAA
CGCGTACTGT TTATCGAACG GCATGGGCAG GTTCAACTGT ATTCGCCAGG TACGAAACAG
GTGAAAACGA TTGCTTCAAT CCCGGTCAGC ACGAAATATA AAGATGTTGA AGGACATGAG
ACCGAAGCTG AAGATGGTTT GCTGGGCGTT AACATAGACC CCAACTTCGA GAAAAACCAC
TGGATATACC TATACTACTC ACCAGCGGGC AGCGAATCTA AGAACAGTCT GGTCCGCTAC
GAAATGCGGG GCGACGAACT GGTTCTATCT TCGAAAAAAG TGTTGCTGGA TGTACCCGTG
CAGCGCGAAC AATGCTGCCA TACCAGTGGC TCCATTGACT GGGACCGCGA AGGCAACCTC
TATCTCTCTA CCGGCGACAA CACCAGCCCC CGCGCCACGC TCTACGCACC TATTGACGAG
CGGCCCGGCC GGGGTCCTTG GGATGCCCAG AAGTCGTCGG GTAATACTAA TGATTTGCGG
GGTAAAATCC TCCGTATCCA TCCCGAAGCC GACGGAACTT ACACCATTCC CGAAGGAAAC
CTGTTTCCAA AAGGCACAAG CCAAACCCGT CCCGAGATCT ATACCATGGG CCACCGTAAC
CCCTACAGGA TTTCGGTAGA TAAGCATACA GGGTATGTGT ACTGGGGCGA TGTAGGCCCC
GACGCGGGCG AAGATTCGGT TGGGGTTGGC CCCACGGCCG AAGACGAATA CAACCAGGCG
CGAAAAGCGG GCAATTTCGG CTGGCCGTAT TTTGTGGGCG ATAATAAAGC CTATTACGAT
AAAGATTTCA CCACCGGAAA AGGAGGTGCC AAATTCGATC CGGCGCATCC GGTCAACGAT
TCGCCCAACA ACACGGGCCT GCGCGACCTC CCGCCTGCCC AGCCTGCGCT CATCTCTTAC
CCGGCTGCCG AGTCCAAAAA ATTTCCGATC ATGGGAACCG GTGGGCGTAG TGCTATGGCC
GGTCCTACCT ATTACAAAGA CGATTTCAAG AACGCCAAAC GCCCTTTCCC GGACTATTAT
AACGGAAAAG TATTTCTCTA TGAGTGGATG CGCGACATGA TTATGGCCGT TGACTTTGAT
GGCAAGGGTG GCATAACCAG CATGGAACGC TTTCTGCCCA ACATGGGCTT CAGTCACCCA
ATCGACATGG CGTTCGGGCC AAACGGTGAT TTATACGTGC TGGAATACGG CACCGGCTGG
TTCCTCAAAA ACGACGATTC GCGTTTGGTA CGCATTGAGT TCAACGCGGG CAATCGTAAG
CCTGCGATAC AGGTAGCGGC CAGTCAGAAG GCAGGGGCGG TACCGCTGAA AGTAGCCTTG
TCATCGGAGG GAACCAAGGA TTTCGATGGC GATGCGCTGA CCTATCAATG GAAAATAGTG
AGCCGAACGG GTGGTCAGCC AACCGTTCTG AATGAACCGA ACCCAACGTT CACGTTTCAG
AAACCGGGAC AGTATAAAGC GATACTGACA GTAACCGATG CGAAGGGTCT GAAAGATACC
CAGGAGGTGG ATATTGTAGC CGGTAACCAG CCTCCGCAGG TAGCCCTGAA CGTAGTGAAC
GGCAATAAGA GCTTCTATTT CCCCGGCCAG CCGGTGGCTT ATCAGGTAAA CGTGACCGAT
AAGGAAGATG GTAGCCTGGC GAGTGGACGC ATTCAGCCTA AACAAGTGCT GGTTCGGGCT
ACGTATCAGG ATGACGCCAA CGCACAGGCC GCGAGTACAT CCGGTGCTGG ACACAAATTC
TCCGAGGCCG CTTACCTGGG GACCGGGCAA ACGCTCATGG AAAAAAGTGA CTGCAAAGCC
TGCCATTTTA CGGATAAAAA ATCGGTAGGA CCCGCGTTTA CGGAAGTAGC GAAACGGTAC
AAAGCTGATG CCAACGCCGT GGCGAGCCTA TCGAATAAGA TCATCAAAGG GGGGGGTGGC
GTTTGGGGCG ATGCCATCAT GACGGCCCAC CCTCAACTGA CTCAGCCCGA CGCGAGCGAA
ATTGTCAAGT ATATCCTGAC CCTTTCCGAC AAGAAAGTGA CAGCCCCGCT GCTCCCGACG
AAGGGAACCT ATACGCCGGG TAAAGACGAA AAAGGAAATC TGGTTTTGCA GGCCTCTTAC
AAAGATAAAG GAGCTAACGG CCTGCCTGCC CAACTGGCCG AACAGGTACT GGTGCTACGG
AATCCGCTGA TCGCGCTGGG CACATCCAAT AGCCAGTCGA AAGGCATCAC ACTGTTCAAA
ATGGGCACTC AGCCTTACCC GCTTGTGGTT GTCATGGGTT CCGACACCTA TGTCAAATTT
AACCAGCTCG ACCTTACCGG TATCCGATCC ATGGAGTTTG CCGTAGCCGC CCCTAAAGCG
CAGTTGAACG CTATGGGTGG TCGAATTGAA GTACGGATTG ACTCCCCAAC GGGCCAACTG
CTGGGCCAGA CGGCAGAGGT TGCGCCCAAT GAAAGCAAAG ACCCGGCCGC CATGTTTACG
CCAACTATGG CCAAAGCAGC CATTATTCCA ACAACGGGCC AGCACGACCT GTACTTCGTT
TTCAAAAACG AGAAGGCCGG AAAAGCCCCT CTTTTCGTAC CCAGTACGGT TCAACTTTCC
AACTAA
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| Protein sequence | MKEIIVSLCL KYALEMTYKR YTLQSFRTTA LLSVGALGLW AYSTRSFTAP GDKPDENRFT
KVVLAEKLNE PLEMAILPDE RVLFIERHGQ VQLYSPGTKQ VKTIASIPVS TKYKDVEGHE
TEAEDGLLGV NIDPNFEKNH WIYLYYSPAG SESKNSLVRY EMRGDELVLS SKKVLLDVPV
QREQCCHTSG SIDWDREGNL YLSTGDNTSP RATLYAPIDE RPGRGPWDAQ KSSGNTNDLR
GKILRIHPEA DGTYTIPEGN LFPKGTSQTR PEIYTMGHRN PYRISVDKHT GYVYWGDVGP
DAGEDSVGVG PTAEDEYNQA RKAGNFGWPY FVGDNKAYYD KDFTTGKGGA KFDPAHPVND
SPNNTGLRDL PPAQPALISY PAAESKKFPI MGTGGRSAMA GPTYYKDDFK NAKRPFPDYY
NGKVFLYEWM RDMIMAVDFD GKGGITSMER FLPNMGFSHP IDMAFGPNGD LYVLEYGTGW
FLKNDDSRLV RIEFNAGNRK PAIQVAASQK AGAVPLKVAL SSEGTKDFDG DALTYQWKIV
SRTGGQPTVL NEPNPTFTFQ KPGQYKAILT VTDAKGLKDT QEVDIVAGNQ PPQVALNVVN
GNKSFYFPGQ PVAYQVNVTD KEDGSLASGR IQPKQVLVRA TYQDDANAQA ASTSGAGHKF
SEAAYLGTGQ TLMEKSDCKA CHFTDKKSVG PAFTEVAKRY KADANAVASL SNKIIKGGGG
VWGDAIMTAH PQLTQPDASE IVKYILTLSD KKVTAPLLPT KGTYTPGKDE KGNLVLQASY
KDKGANGLPA QLAEQVLVLR NPLIALGTSN SQSKGITLFK MGTQPYPLVV VMGSDTYVKF
NQLDLTGIRS MEFAVAAPKA QLNAMGGRIE VRIDSPTGQL LGQTAEVAPN ESKDPAAMFT
PTMAKAAIIP TTGQHDLYFV FKNEKAGKAP LFVPSTVQLS N
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