| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4665 |
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| Symbol | |
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| ID | 8728429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5681541 |
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| End bp | 5683760 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003389442 |
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| Protein GI | 284039512 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.785854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGTA AGGTATTACA GCTATGGCTG GCTGTGCTGA GTGCGTGCTT ATCTGGCAAT
GTATCGGCTC AGCTAATCAG TCAAAAAATG GCCTCTCAAT CCCCAACGAC GGATTCTCTA
CCCGCCCGAA CGCTGAATCA GGTGACGGTA AAAGGAAATC GGACGACGGT TGTGGAGTCG
CTGCCCAATG TACATGGTAC GTATTTGATG AGTGGTAAGA AGAGTGAAGT CATTCGGCTG
GGGGAAGTCG ATGCGAACGT TGCCGAAAAA ACTCCCCGGC AACTCTTTGC CCGGATTCCC
GGCGTGTTTG TCTACGACAT GGATGGTACC GGAAATCAGA TTAACATGGC TACACGAGGG
CTAGACCCGC ATCGGTCCTG GGAAAATAAC ATTCGTCAGA ATGGGGTTAT CACTAACTCC
GATATGTACG GCTACCCAGC CAGTCACTAT TCGCCACCCA TGGAGAGCAT CAACCGCATT
GAACTCGTTC GCGGAACGGC GTCCCTTCAG TATGGGGCGC AGTTTGGCGG TATGCTGAAT
TACGTAACGA AAGGGGCCGA CACAACGCGC TGGTTTGGTT TTGAAACGAT CAATTCGGGT
GGTTCATACG GGATGCGGAG TTCCTATTCG GCTATTGGTG GCCGGGTGGG TAAATGGACG
TACTATGCCT ATTACTACCG GCGGCATTCG GACGGGTATC GGCAAAATAG CCAGTCCAAC
GCCGAAGCTC AGTTTGGTCG TTTGGCGTTT CAGGCAACGC CGAACTTGAA CCTAACGGCC
GAGTTGGGAC GGTCGACGTA CACGTACCAG ATTCCCGGTC CATTGACCGA TGTCATGTTT
GCTCAGAACC CGCGCCAGTC GACACGAAGC CGGAACTACT TTAACCCGGA TATTTATATT
CCGTCGCTTA AGGCCGACTG GATACTCTCG GATCGTACAC GACTGTCATG GACAGTTTCA
GCGGTGATCG GTGCCCGAAA CAGCATTCAA CTGGATGCGT TTGCGACCGT TCCTGATACC
ATTAGTCGAG TGACGGGTCA GTACAAAGCC CGGCAGGTTG ACGTCGATCA CTTCAATAGC
TATACGTCCG AACTTCGGCT GCTGCATCAG TATACCATCG GCAGTGTCCG GTCGGCGCTG
GCGGCTGGTG TGCAGTTGAT GGACAACGAT CTGCATCGTC AGCAGTTGGG CGTTGGTACG
ACTGGCACTG ATTTCGACCT CACGCTGACC AGTGCGTTCA GACGTGATCT GCACTACCGA
ACCCGCAATG TGGCAGTCTT CGCTGAAAAT CAGATCAACC TGACTAGCCG ATTAGCTATT
TCTCCGGGAC TGCGGTTGGA ACACGGCAAA ACGGAAATGC GGGGTACTAT CGCGTATTAC
ATGCCGGAAA ATCTGCCAAC CGACATCAGT CATCACTTTG TGCTGCTGGG TGTTAACGGC
GAATATCGGG TCAATAATAC CGTGAAAGTA TACGGCGGCT GGTCGCAGGC CTACCGTCCG
ATTGTCTTTA AAGACATCAT CCCCACGTCG GTCTACGAGC GTATCGATAA AAATCTGAAA
GATGCCTATG GCTACAATGC CGAGATTGGC GTGGACGGAC GCTGGCAGGG TGTACACTTG
AATATAACGG CTTTCGATCT GCTGTACCGG AATCGTATGG GTACTCTGTT GCTGACTGAT
ACAGACGGGT CGAATTACAT TTTCCGAACC AACATCGGCG ACAGCCGGAG CACGGGTATC
GAAGCGCTCA TTGAAGGACA GCTTATGCGG GTAGGAAAGG TGCTGATCAG CGGCTTTACG
TCAACTGCTT TCAACAACGC CCGTTACCTC AACGGGCGCG TGTCGGCCGG GACGGAGAAC
CGGACAATCA CGGGCAATCA GGTGGAGTCT GCTCCGCGTT GGACAAACCG AAACGGTCTG
ACCGCCCGCT ATGGAACGGT CAGCCTGACG CTGCAATACA GCTACGTTGG CCCAACCTTC
TCCGACGCGC TCAATACGCC TGTTCCTTCG GCTAATGGTG CCGTTGGACC GGTACCCGCT
TACAGGCTGT GGGATCTGAA CAGCACCTGG CACATCAACC GCAGATTTAC CGTTCGGGGC
AGTGTCAATA ACCTGTTGAA CAAGCAATAC TTTACCAAAC GCCCAACCTT TTATCCAGGA
CCGGGCGTTT GGTCGTCGGA CGGACGAAAC GCCGTATTGA CCGTTGGGTG GACGATTTGA
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| Protein sequence | MESKVLQLWL AVLSACLSGN VSAQLISQKM ASQSPTTDSL PARTLNQVTV KGNRTTVVES
LPNVHGTYLM SGKKSEVIRL GEVDANVAEK TPRQLFARIP GVFVYDMDGT GNQINMATRG
LDPHRSWENN IRQNGVITNS DMYGYPASHY SPPMESINRI ELVRGTASLQ YGAQFGGMLN
YVTKGADTTR WFGFETINSG GSYGMRSSYS AIGGRVGKWT YYAYYYRRHS DGYRQNSQSN
AEAQFGRLAF QATPNLNLTA ELGRSTYTYQ IPGPLTDVMF AQNPRQSTRS RNYFNPDIYI
PSLKADWILS DRTRLSWTVS AVIGARNSIQ LDAFATVPDT ISRVTGQYKA RQVDVDHFNS
YTSELRLLHQ YTIGSVRSAL AAGVQLMDND LHRQQLGVGT TGTDFDLTLT SAFRRDLHYR
TRNVAVFAEN QINLTSRLAI SPGLRLEHGK TEMRGTIAYY MPENLPTDIS HHFVLLGVNG
EYRVNNTVKV YGGWSQAYRP IVFKDIIPTS VYERIDKNLK DAYGYNAEIG VDGRWQGVHL
NITAFDLLYR NRMGTLLLTD TDGSNYIFRT NIGDSRSTGI EALIEGQLMR VGKVLISGFT
STAFNNARYL NGRVSAGTEN RTITGNQVES APRWTNRNGL TARYGTVSLT LQYSYVGPTF
SDALNTPVPS ANGAVGPVPA YRLWDLNSTW HINRRFTVRG SVNNLLNKQY FTKRPTFYPG
PGVWSSDGRN AVLTVGWTI
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