Gene Slin_4648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4648 
Symbol 
ID8728412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5658206 
End bp5658787 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content43% 
IMG OID 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_003389425 
Protein GI284039495 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.030471 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.671776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTCT CCATCATCCA TCAGCCAAAC ATAAATGTCA TGCTGAAAAC CCGCCGAACG 
TATACGCCAA TTCGTATCGA CATGACACCG TTCGTGTCGG TTGCGTTACT GTTGATTGTC
TTTTTTGTGT TGATGAAGAT GGTGCAACGA CCGAATCAGT TGCAAGTTCA ATTACCCGAA
GATGGTCATT GTATCTGGTA CAACCCGAAC GCTGATGCCA GTTTATTTCT ACTGGCGAAT
AATAGAATTG GGTTTCTTAC CTACAGACCT GACGGTTCTG GAGCTGAGTT TATTGAAACA
GACTATTCGT TCAAAGGACT TAGGCAGCAG TTAATGTATC TCATGCCGAA CAGGCGCACA
ATTGTTCTGA TTACACCGAC TCAGCAGGCC ACTTTTAAAA ACATTGTGGA TGTGTTGGAT
GAACTCCAAA TTCAGGGACC AATAAATTTC AGGCTTAGCT ATGAGATTAC ACCTGGCGAA
CGTAAAATGC TTCATAGCTA TGAGGTATAT AAAGCAAGTC ATCCTAAGCG ACCGATTCTG
GTGCATTTGC CGTTGTATCC TCACCGACTA ATTGACGCCT GA
 
Protein sequence
MLLSIIHQPN INVMLKTRRT YTPIRIDMTP FVSVALLLIV FFVLMKMVQR PNQLQVQLPE 
DGHCIWYNPN ADASLFLLAN NRIGFLTYRP DGSGAEFIET DYSFKGLRQQ LMYLMPNRRT
IVLITPTQQA TFKNIVDVLD ELQIQGPINF RLSYEITPGE RKMLHSYEVY KASHPKRPIL
VHLPLYPHRL IDA