Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4648 |
Symbol | |
ID | 8728412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5658206 |
End bp | 5658787 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_003389425 |
Protein GI | 284039495 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.030471 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.671776 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCTCT CCATCATCCA TCAGCCAAAC ATAAATGTCA TGCTGAAAAC CCGCCGAACG TATACGCCAA TTCGTATCGA CATGACACCG TTCGTGTCGG TTGCGTTACT GTTGATTGTC TTTTTTGTGT TGATGAAGAT GGTGCAACGA CCGAATCAGT TGCAAGTTCA ATTACCCGAA GATGGTCATT GTATCTGGTA CAACCCGAAC GCTGATGCCA GTTTATTTCT ACTGGCGAAT AATAGAATTG GGTTTCTTAC CTACAGACCT GACGGTTCTG GAGCTGAGTT TATTGAAACA GACTATTCGT TCAAAGGACT TAGGCAGCAG TTAATGTATC TCATGCCGAA CAGGCGCACA ATTGTTCTGA TTACACCGAC TCAGCAGGCC ACTTTTAAAA ACATTGTGGA TGTGTTGGAT GAACTCCAAA TTCAGGGACC AATAAATTTC AGGCTTAGCT ATGAGATTAC ACCTGGCGAA CGTAAAATGC TTCATAGCTA TGAGGTATAT AAAGCAAGTC ATCCTAAGCG ACCGATTCTG GTGCATTTGC CGTTGTATCC TCACCGACTA ATTGACGCCT GA
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Protein sequence | MLLSIIHQPN INVMLKTRRT YTPIRIDMTP FVSVALLLIV FFVLMKMVQR PNQLQVQLPE DGHCIWYNPN ADASLFLLAN NRIGFLTYRP DGSGAEFIET DYSFKGLRQQ LMYLMPNRRT IVLITPTQQA TFKNIVDVLD ELQIQGPINF RLSYEITPGE RKMLHSYEVY KASHPKRPIL VHLPLYPHRL IDA
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