| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4621 |
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| Symbol | |
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| ID | 8728385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5617470 |
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| End bp | 5619845 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003389398 |
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| Protein GI | 284039468 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.158331 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA ACTACCTAAA AATCGCCTGG CGAAACCTCA CAAAGAACAA AGTTTACTCC
TTTATCAACA TCAGCGGGCT GGCAACGGGT ATGGCCGTAA CGATCATGAT TGGCCTGTGG
GTGTACGACG AGCTATCCTT CGACCGACAA ACCAAACATT ACGACCGCAT TGCCCAACTT
TGGCAGTTTG TAACGTTCGA TGTCGAAAAG ACATCGTACA ACTCGTTACC CATCCCGCTA
GCTCAGGAAC TCCGCAGTAA ATACCCCGAT TTTGAATTGG TTAGTCTGGC TTCATTCGAC
CGTACGGCGG TGCTAGCTTC GGGCGAGAAC CGATTCACCA AAACGGGCAA TTACGTGGAG
CCGGATTTCT TACCGATGAT GTCGGTTAAG ATGCTGGTCG GTACTTACAG AGGCTTAACG
GATGTAAATA GCATTTTACT GTCGGCGGCT ACGGCTAAAA ACTTATTTGG TACAGCTGAT
CCTATCAATA AGCTTATCAA ACTCGACAAT AAAGTGAACG TCCGGGTAAC GGGGGTTTAC
GAAGATTTTC CGCAGAACAG CAGCTTCAAA GCCACGCTTT TTCTGGCTCC CTGGCGTCTG
TTAATGGCAA TTAACGAGAA TGCCAGAGGT CAGCTGGATC AATGGGACAG TAATGGGTTC
CCGATTTATG TACAACTCAA AAACGGGGTT TCAGCCGACC AGGCCTCGGC CAGGATCAAG
GATATTCGAA TGAAGCGGGA GAACCCACCG CCCTATAAAC CCGAATTTTT TCTGCATCCA
ATGTCGAAGT GGCATTTGTA TTCCGATTTC AAGAACGGGG TCAATACGGG TGGACTCATT
CAGTTTGTGT GGCTGTTTGG CGTCATTGGC GTGTTCGTCT TGTTGCTGGC CTGCATCAAC
TTCATGAATC TGAGCACGGC CCGCAGCGAG AAACGCGCCA AAGAAGTGGG TATCCGCAAG
GCCGTCGGCT CGCTACGAGA ACAGCTCATC AGCCAGTTTT TTGCCGAGTC GCTTTTAGTA
ACTGGACTAG CGTTTGTACT GGCCCTGGTG CTGGTTCAGC TGTCGCTGCC GCTGTTTAAC
ACGATTGCGG ATAAAGAAGT ACAAATTTTA TGGTTCAGCC CCGTGTTCTG GTTAATTGGC
CTGGGATTTA CCCTGCTCAC CGGGCTGATC GCGGCCAGTT ATCCGGCGCT GTACCTGTCG
TCTTTCCAAC CAATAAAAGT CCTGAAAGGA ACCATCAAAA TGGGGCGTTT TGCGGCTATA
CCTCGTAAAG TGCTGGTCGT TTTTCAGTTT GCCGTGTCCA TTACGCTCAT CATCGGCACC
ATAATCGTGT TGCGTCAAAT TGAGTTTGCC AAAGATCGAC CGGTTGGGTA CAGCCGCAGC
AAACTAGTCG AAGTGAGGAT AAATACACCC GAACTGGTTG GCCAATACAA TCCGTTGCGA
ACCGATTTAC TAAACACGGG CGCCGTTGCC AACATGTCGG AATCGGATAA ACCGCTAACG
GCTGACTACG GCGGCACAAC CAATATTTCA TGGCCGGGCA AAACGCCCGA CATGCACCCC
TTGATCATTG CCAACCTGAT TACGCATGAT TTTGGAAAGA CTATAGACTG GCAGCTAACA
ACCGGGCGCG ATTTCTCAAG GGCGTTTACC ACCGATTCAT CGGCGATGAT ACTGAACGAA
TCGGCCCTTA AGTTGATGGG GCTGACCCGG CCACTAGGCA CATTGATTAA GCAAAGTGGC
CGGGAATACC GGGTTATTGG CATCGTGAAA GACATTATCA ACGGCAATCC ATTTGAAGCG
ATAAAACCAT CTTTTTTCGT ACTAGACTAC AGGAATGTGA ACATTATCAC CCTTAAGCTG
GCTCCGCAAG TGCCAACCAG CCAGGCACTG GAAAAAGTGG CGGAGGTGTT CAAAAAATAC
AACCCGGCGG CTCCATTCGA GTATACGTTT GTAGATGATG AGTACGGCAA AAAATTTGGC
AGAGAAACTC GTATCGGCAA TCTGGCAATG ATTTTTGCCG CCTTCGCTAT CTTTATTTCC
TGCCTTGGCA TTTTTGGCTT GGCTTCGTTT ATGGCCGAGC AGCGTACCAA AGAGATCGGT
GTCCGCAAAG TGCTGGGAGC CTCGGTGATG AACCTATGGG GACTACTTTC CAGAGATTTT
ATCGTGCTGA TTTTGATTTC GGTTGGAATT GCTACACCCA TAGCCTGGTA CTTTCTGAAC
AGCTGGCTGC AGAATTACAC TTACCGCACC ACAATTGTCT GGTGGGTCTT TGCCCTGACC
GGCGCAGGTA CGTTATTGCT TACGCTGCTT ACAGTGAGTT TCCAGAGCGT GAGAGCCGCG
TTGATGAATC CGGTAAAATC CCTGCGGTCG GAGTAG
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| Protein sequence | MIRNYLKIAW RNLTKNKVYS FINISGLATG MAVTIMIGLW VYDELSFDRQ TKHYDRIAQL
WQFVTFDVEK TSYNSLPIPL AQELRSKYPD FELVSLASFD RTAVLASGEN RFTKTGNYVE
PDFLPMMSVK MLVGTYRGLT DVNSILLSAA TAKNLFGTAD PINKLIKLDN KVNVRVTGVY
EDFPQNSSFK ATLFLAPWRL LMAINENARG QLDQWDSNGF PIYVQLKNGV SADQASARIK
DIRMKRENPP PYKPEFFLHP MSKWHLYSDF KNGVNTGGLI QFVWLFGVIG VFVLLLACIN
FMNLSTARSE KRAKEVGIRK AVGSLREQLI SQFFAESLLV TGLAFVLALV LVQLSLPLFN
TIADKEVQIL WFSPVFWLIG LGFTLLTGLI AASYPALYLS SFQPIKVLKG TIKMGRFAAI
PRKVLVVFQF AVSITLIIGT IIVLRQIEFA KDRPVGYSRS KLVEVRINTP ELVGQYNPLR
TDLLNTGAVA NMSESDKPLT ADYGGTTNIS WPGKTPDMHP LIIANLITHD FGKTIDWQLT
TGRDFSRAFT TDSSAMILNE SALKLMGLTR PLGTLIKQSG REYRVIGIVK DIINGNPFEA
IKPSFFVLDY RNVNIITLKL APQVPTSQAL EKVAEVFKKY NPAAPFEYTF VDDEYGKKFG
RETRIGNLAM IFAAFAIFIS CLGIFGLASF MAEQRTKEIG VRKVLGASVM NLWGLLSRDF
IVLILISVGI ATPIAWYFLN SWLQNYTYRT TIVWWVFALT GAGTLLLTLL TVSFQSVRAA
LMNPVKSLRS E
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