| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4589 |
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| Symbol | |
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| ID | 8728353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 5562445 |
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| End bp | 5563122 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | |
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| Product | ABC transporter related protein |
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| Protein accession | YP_003389367 |
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| Protein GI | 284039437 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00504379 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCCAGA CAATTAACCT TCAAAAACTC TTTTCGACCG AAGAAGTCGA AACCACCGCC
CTCAACGGCA TCAACATGGA TGTGAAAGAC GGCGAGTTCG TTGCCATCAT GGGGCCATCG
GGCTGCGGCA AATCCACGCT GCTTAACATC CTGGGTCTAC TGGATAACCC CAGCGAAGGC
GAGTACAATT TCTACGGCAC GGAGGTCGCC AAAATGACCG AACGTCAGCG GGCGCAACTC
CGCAAAGGCT CCATCGGCTT CGTGTTCCAG AGCTTTAACC TGATCGACGA ACTGACCGTA
TATGAGAACG TCGAGCTGCC CTTGCTGTAC CTGAAAACGC CCCCCGACGA GCGGAAGAAG
CGCGTAGAAG AGGCCTTGGA ACGGATGAGC ATCATGCACC GGCGCAATCA CTTCCCGCAG
CAGCTTTCGG GTGGTCAGCA GCAGCGGACG GCCATCGCAC GGGCGGTTGT TGCCAAACCC
AAGCTGATCC TGGCCGATGA ACCGACGGGT AACCTCGACT CGAAGAATGG CGAAGAAGTA
ATGAAACTAT TGGGCGAACT GAACGACGAA GGCACCACGA TTATCATGGT AACCCACTCA
CCCTACGACG CCGGTTTCGC GCATCGCATT GTGAACTTGT TTGATGGTAA GGTGGTCACG
GAAAATTTCC ACGTGTAG
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| Protein sequence | MIQTINLQKL FSTEEVETTA LNGINMDVKD GEFVAIMGPS GCGKSTLLNI LGLLDNPSEG
EYNFYGTEVA KMTERQRAQL RKGSIGFVFQ SFNLIDELTV YENVELPLLY LKTPPDERKK
RVEEALERMS IMHRRNHFPQ QLSGGQQQRT AIARAVVAKP KLILADEPTG NLDSKNGEEV
MKLLGELNDE GTTIIMVTHS PYDAGFAHRI VNLFDGKVVT ENFHV
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