Gene Slin_4547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4547 
Symbol 
ID8728311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand+ 
Start bp5512030 
End bp5512737 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003389326 
Protein GI284039396 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.294634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAAG GGGAGCAAAA CGTTATTGAG TTAGTAAATC AATGGGCCGC TTATAGTGCC 
GTCACGCCAG ATGCCACGCT GGCGGGTTTC TGTCTGCATT TTCTGACCGA TCAGTTGCAT 
GAATCGGCAA CAAACGGGGC GATTCCTACC GTCGATGACG ACAACTTGCA CAACGACCAA 
TGGAAAGAGA GCCTCAGCGA TACGGTACAG CAGCCGATGA TACCCATTCG GCCCGAAGCC 
CGATTAGCAG CATTGGTCGG CAGGCTATCA AAATATGCTT ATTTCTACTC TAAAAAGGCC 
ATGCAGTCAC TGGATGTCAA AGGCATGGAC GATCCGGTTT ATCTGCTTGT CGTGTTACAG 
ATGGGTACGC CTAAAAAGAG CGAAGTGATC TATGAAATGA TGGCGGAGTT CGCGTCGGGT 
ACCGATATTA TCAACCGGCA CATCCGGATG GAATACCTCG AAGAGTTCCC CGACGAACAG 
GATCGCCGGT CCAAACGCCT GCGTTTAACA CCAAAAGGGC TGGCTATTAT TCAGGAATGT 
TTCCCCATCA TGAATCAGGT AGCCGATGTT GCCTTCGGTT CATTGACAGA CGGTGAGAAG 
GCCATTCTGG TACAGATTCT TGACAAACTC GACCGCTATC ATACCGACCA TTACAAACAA 
AGTCGGAATA GTGAATTCAA CGAGGTATAT GAACGCATGG TAGGGTAA
 
Protein sequence
MDKGEQNVIE LVNQWAAYSA VTPDATLAGF CLHFLTDQLH ESATNGAIPT VDDDNLHNDQ 
WKESLSDTVQ QPMIPIRPEA RLAALVGRLS KYAYFYSKKA MQSLDVKGMD DPVYLLVVLQ 
MGTPKKSEVI YEMMAEFASG TDIINRHIRM EYLEEFPDEQ DRRSKRLRLT PKGLAIIQEC 
FPIMNQVADV AFGSLTDGEK AILVQILDKL DRYHTDHYKQ SRNSEFNEVY ERMVG