Gene Slin_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4464 
Symbol 
ID8728224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5405853 
End bp5407691 
Gene Length1839 bp 
Protein Length612 aa 
Translation table11 
GC content59% 
IMG OID 
Productglucosamine/fructose-6-phosphate aminotransferase, isomerizing 
Protein accessionYP_003389243 
Protein GI284039313 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.582003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGCA TTGTTGCTTA TATAGGGCAC CGGGAAGCCT GCTCCCTGGT GCTGAAAGGA 
TTGAAACGAC TTGAGTACCG GGGCTACGAC AGCGCCGGCA TCGCCCTGAT CAACCAGCAA
GGACTGGCCG TCTTTAAGAA AAAAGGGAAA GTAGCCGCCC TCGAACACGA ACTCACCGGG
AAAGACGTCC AGGCAAACAT CGGCATGGGA CACACCCGAT GGGCCACCCA CGGCGAACCA
AACGACCTCA ACGCTCACCC CCACTACTCC TTCCACCGCA AACTGGCCAT CATCCACAAC
GGCATCATCG AGAACTATGC CGCCATCAAA CAGGCCCTGC TCAAGAAAGG TCACACCTTC
GCCAGCGAAA CCGATACCGA GGTGCTGGGC CAGTTCATCG AAGACATCTG GGAAAACAAC
GGCGGCTCCC TGGAAGAAGC CGTCCGACTG GCCCTGCAGG AAGTGGTCGG GGCCTATGCC
ATTGTCATCA TGAGCCAGGA GGAGCCCAAC CAGCTCATTG CCGCCCGCAA AGGCTCGCCC
CTGGTCATTG GTGTGGGCCA GCAGGAATTC TTCCTGGCCT CCGATGCCAC CCCCATTGTC
GAGTATACCA AAGACGTCAT CTACCTCAAC GACTACGAAG TCGCCGTTAT CAAAGATGGT
GAACTGTCCG TTGTTACCCT GGACAACACA ACCACTACTC CCTACGTCCA TAAAGTTGAG
TTGGAGCTGG AAGCCATCGA GAAAGGCGGC TTCGACCACT TCATGCTCAA GGAGATCTTC
GAGCAGCCCC GCTCCATTGC CGACTCCATG CGGGGGCGGG TTCAGGCCCA GGAAGGCCTC
CTCCAACTGG GCGGCCTGCG CGACTACCTC GACAAGCTGG CCAAGTCCAA GCGCATCGTT
ATCATTGGCT GCGGCACTTC CTGGCACGCC GGGCTGGTAG CCGAGTACAT CTTCGAAGAA
CTGGCCCGCA TTCCCGTGGA GGTCGAGTAC GCGTCGGAGT TCCGTTACCG CAACCCCATC
ATCAAGGAAG GTGATATCGT GATTGCCATC TCCCAGTCGG GCGAGACGGC CGACACGCTG
GCGGCCATCG AGCTGGCCAA GTCGAAGGGG GCCACCATCT TCGGGGTTTG TAACGTGGTG
GGCTCGTCTA TTGCCCGGGC CACCCATGCG GGGGCCTTCA CCCACGCGGG TCCTGAGATT
GGGGTAGCCA GCACGAAGGC TTTCACAGCC CAGGTGACGG TGCTGACCCT GATGGCCCTG
GCAGCGGCTC ATCGGAAAGG GACGCTCTCG GAGTCGCTGT TCCGGCAGCT GCTGACGGAG
CTGGAGAGCA TCCCGGCCAA GGTGGAGCAG GTCTTACAGG CGGCCGACAA GATCAAGGAG
ATCGCCTACA TTTTCACGTA TGCGCGCAAC TTCATCTATC TGGGTCGTGG GCTGAACTTT
CCGGTGGCGC TGGAGGGGGC CCTGAAGCTG AAAGAGATCA GTTACATCCA CGCCGAGGGT
TACCCGGCGG CCGAGATGAA GCACGGTCCG ATTGCGCTGA TCGACGAGGA CATGCCGGTG
GTGGTGATTG CCACTCAGGA CAGTTCGTAC GAGAAGGTGG TGTCCAACAT TCAGGAAGTG
AAAGCGCGGA AAGGTCGGGT AATCGCCATT GTGACGGAGG GCGACAGTCA CTTACCGGGG
CTGGTAGATT TCACCATTGA GATACCCAGG GTGCACGAGA TTCTGGTGCC GTTGGTGTCG
GTGGTGCCCT TGCAGTTGCT GTCGTATTAC ATTGCCGTGA TGCGGGGCCG CAACGTGGAC
CAGCCCAGAA ACCTGGCCAA GTCCGTAACG GTGGAATAA
 
Protein sequence
MCGIVAYIGH REACSLVLKG LKRLEYRGYD SAGIALINQQ GLAVFKKKGK VAALEHELTG 
KDVQANIGMG HTRWATHGEP NDLNAHPHYS FHRKLAIIHN GIIENYAAIK QALLKKGHTF
ASETDTEVLG QFIEDIWENN GGSLEEAVRL ALQEVVGAYA IVIMSQEEPN QLIAARKGSP
LVIGVGQQEF FLASDATPIV EYTKDVIYLN DYEVAVIKDG ELSVVTLDNT TTTPYVHKVE
LELEAIEKGG FDHFMLKEIF EQPRSIADSM RGRVQAQEGL LQLGGLRDYL DKLAKSKRIV
IIGCGTSWHA GLVAEYIFEE LARIPVEVEY ASEFRYRNPI IKEGDIVIAI SQSGETADTL
AAIELAKSKG ATIFGVCNVV GSSIARATHA GAFTHAGPEI GVASTKAFTA QVTVLTLMAL
AAAHRKGTLS ESLFRQLLTE LESIPAKVEQ VLQAADKIKE IAYIFTYARN FIYLGRGLNF
PVALEGALKL KEISYIHAEG YPAAEMKHGP IALIDEDMPV VVIATQDSSY EKVVSNIQEV
KARKGRVIAI VTEGDSHLPG LVDFTIEIPR VHEILVPLVS VVPLQLLSYY IAVMRGRNVD
QPRNLAKSVT VE