Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4460 |
Symbol | |
ID | 8728220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5401829 |
End bp | 5403064 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | nucleoside recognition domain protein |
Protein accession | YP_003389239 |
Protein GI | 284039309 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTAA ATTACATCTG GGTTGCCTTT TTTGTCATTG CGTTTATTGT TGCGCTGGCT AAACTGATTT TCCTGGGAGA CACCGAAATC TTTAAAATTC TGGTCGAAGG GCTGTTCGAT TCGTCGAAAG TGGCTGTCAT GGACATTGCC TTGCCGCTGG CTGGGGTGAT GACGTTTTTT CTGGGGCTGC TCAACATCGG CGAGAAAGCG GGAGCCATTA ATTTCCTGGC CCGTATTATT GGCCCGTTCT TTCACAAGCT CTTCCCTGAA GTGCCCCGCG ACCACCCGGC CAACGGGCAG ATGATCATGA ACTTCTCGGC CAATATGCTT GGTCTGGATA ATGCGGCCAC GCCCTTCGGT TTACGGGCCA TGGCGAGTTT GCAGGAGTTG AACCCGACGA AAGAAACGGC CTCCAATGCC CAGATTATGT TCCTGGTGCT CCACACATCG GGCTTAACGA TTATTCCGCT GAGCATCATG GCACAGCGGG CTATCCTGGG AGCTAAAGAC CCGTCGGATA TTTTCATTCC GTGCCTGATT GCTACGTACG TGGCCACGGT CGTCAGTATG ATTGCGGTGG CCATCAAGCA GCGGATCAAC CTGATAAACA CCACCGTTCT GGGCTGGCTG GGGGGTATCA CGAGCCTGAT TGGGCTGGCA TTGTGGTTCC TGTCCACGAA GACAAAAGAC GAGATTGAGG TTATCTCCAA GGTAACGGGT AACCTCGTGC TGATGCTCAT TGTCGTGTCG TTTCTGCTGG GGGCGATGCG CAAAAAAGTA GATATTTTCG ATGCCTTCAT CGAAGGAGCC AAAGGCGGTT TCGAAACGTC AGTACGCATT ATTCCTTATC TGGTGGGCAT GTTGGTCGCC ATCGGGGCCT TTCGAAACTC CGGCGCGATG GACTACGTGA TCGACGGGCT GAAATACGTA TTCAGCCTTA CGGGTATCAA TACCGAGTTT ACCGATGCCT TGCCGGTGGC CCTGATGCGT CCGCTAAGCG GCTCAGGATC GCGGGCATTG ATGATCGACG CCATGAAGCA GTTTGGACCC GATTCGTTTG TCGGGCGATT GGCCTGCATG TTCCAGGGGG CTGCCGATAC CACATTTTAT ATTGTGGCCC TTTACTTTGG CTCGGTCGGA ATCCGCAATT CGCGGTATGC TATTCCGTTC GGACTATTCG CCGATTTAAT GGGCGTAATA GCTGGTATTG CGCTGGGTTA TTTCTTCTTT CACTGA
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Protein sequence | MALNYIWVAF FVIAFIVALA KLIFLGDTEI FKILVEGLFD SSKVAVMDIA LPLAGVMTFF LGLLNIGEKA GAINFLARII GPFFHKLFPE VPRDHPANGQ MIMNFSANML GLDNAATPFG LRAMASLQEL NPTKETASNA QIMFLVLHTS GLTIIPLSIM AQRAILGAKD PSDIFIPCLI ATYVATVVSM IAVAIKQRIN LINTTVLGWL GGITSLIGLA LWFLSTKTKD EIEVISKVTG NLVLMLIVVS FLLGAMRKKV DIFDAFIEGA KGGFETSVRI IPYLVGMLVA IGAFRNSGAM DYVIDGLKYV FSLTGINTEF TDALPVALMR PLSGSGSRAL MIDAMKQFGP DSFVGRLACM FQGAADTTFY IVALYFGSVG IRNSRYAIPF GLFADLMGVI AGIALGYFFF H
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