Gene Slin_4335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4335 
Symbol 
ID8728095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5256876 
End bp5257568 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003389116 
Protein GI284039186 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.400802 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCAGC CTCATAAATC CATTATCATG AAGATCAGTT TAGTAGTTTG CCTGTTGTTT 
GTGGGCACCT GGATAACAAA AAAGGGCCAC TTTTCCGCAA CAGATACCCC GTTCGAGGCT
GAAATCAAGG CGTTTGAGAC GCAGGATCAG CAGTCTCCGC CCCCCCAGAA CGCCATCGTT
TTTACGGGAA GCTCGTCCAT CCGGCACTGG GAAAACCTGT CGACGTACTT TCCCGGCAAG
CCAATAATTC AGCGTGGGTT TGGCGGTTCG GAGCTGAGCC ATGTACTGCT CTATGCCGAC
CGGATCATTA CTCCTTATCA CCCAAAGCAG GTTGTCATCT ACGCGGGCGA GAACGACATT
GCTATGGGGA AACAAACCGG TCGGCAAACC TTCGACCGGC TGGTTGCCTT GTTTACGCAC
GTTCGGCAAA AGCTGCCCGA TGCTACGTTT ACGTTTATTT CCATAAAGCC CAGCCCGTCG
CGCCGACAGT ATTTCGCGGA GAACGACACG GCCAACCAGC TTATCAAAGA CTATCTGGCC
ACGCAGGCAA ACACCCAATT TGTGGATATC CGGCCAATTA TGCTTAGCAA AAATGGTCAG
CCCGAGCCCA TTCTGTTTAA GTCGGATAGC CTGCATATGC TACCGGCCGG TTACGAGCGC
TGGGGTCGTG TGCTGAGCCC TTATTTGAAA TGA
 
Protein sequence
MHQPHKSIIM KISLVVCLLF VGTWITKKGH FSATDTPFEA EIKAFETQDQ QSPPPQNAIV 
FTGSSSIRHW ENLSTYFPGK PIIQRGFGGS ELSHVLLYAD RIITPYHPKQ VVIYAGENDI
AMGKQTGRQT FDRLVALFTH VRQKLPDATF TFISIKPSPS RRQYFAENDT ANQLIKDYLA
TQANTQFVDI RPIMLSKNGQ PEPILFKSDS LHMLPAGYER WGRVLSPYLK