Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4335 |
Symbol | |
ID | 8728095 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5256876 |
End bp | 5257568 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003389116 |
Protein GI | 284039186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.400802 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCAGC CTCATAAATC CATTATCATG AAGATCAGTT TAGTAGTTTG CCTGTTGTTT GTGGGCACCT GGATAACAAA AAAGGGCCAC TTTTCCGCAA CAGATACCCC GTTCGAGGCT GAAATCAAGG CGTTTGAGAC GCAGGATCAG CAGTCTCCGC CCCCCCAGAA CGCCATCGTT TTTACGGGAA GCTCGTCCAT CCGGCACTGG GAAAACCTGT CGACGTACTT TCCCGGCAAG CCAATAATTC AGCGTGGGTT TGGCGGTTCG GAGCTGAGCC ATGTACTGCT CTATGCCGAC CGGATCATTA CTCCTTATCA CCCAAAGCAG GTTGTCATCT ACGCGGGCGA GAACGACATT GCTATGGGGA AACAAACCGG TCGGCAAACC TTCGACCGGC TGGTTGCCTT GTTTACGCAC GTTCGGCAAA AGCTGCCCGA TGCTACGTTT ACGTTTATTT CCATAAAGCC CAGCCCGTCG CGCCGACAGT ATTTCGCGGA GAACGACACG GCCAACCAGC TTATCAAAGA CTATCTGGCC ACGCAGGCAA ACACCCAATT TGTGGATATC CGGCCAATTA TGCTTAGCAA AAATGGTCAG CCCGAGCCCA TTCTGTTTAA GTCGGATAGC CTGCATATGC TACCGGCCGG TTACGAGCGC TGGGGTCGTG TGCTGAGCCC TTATTTGAAA TGA
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Protein sequence | MHQPHKSIIM KISLVVCLLF VGTWITKKGH FSATDTPFEA EIKAFETQDQ QSPPPQNAIV FTGSSSIRHW ENLSTYFPGK PIIQRGFGGS ELSHVLLYAD RIITPYHPKQ VVIYAGENDI AMGKQTGRQT FDRLVALFTH VRQKLPDATF TFISIKPSPS RRQYFAENDT ANQLIKDYLA TQANTQFVDI RPIMLSKNGQ PEPILFKSDS LHMLPAGYER WGRVLSPYLK
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