| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4333 |
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| Symbol | |
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| ID | 8728093 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 5253154 |
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| End bp | 5255430 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | FG-GAP repeat protein |
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| Protein accession | YP_003389114 |
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| Protein GI | 284039184 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00966426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.30257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TGTTTACGCT TTGTTTTTTA GCAATTCCAT TTCTCACCCA TGCGCAGTCG
GGCGGGAAGA TCGCGTTTCG ATACGACCAG AGCCCAACCG TAAGCATTAA TAACCGCCCG
CTGCTCAATC CGTGGGTGGG TGGCCTGAAC ACGACGCAGT ATTCAACCAT TCGCCTGAAC
AACGACACCC GCGACGATCT GGCCGTTTAC GACCGGACAA CCGGTAAGGT CAGCACGTTT
ATCGCCGTCG ACAATCCCAT TGGCAGCGGC ACGGTATGGC AGTACGCGCC CGAGTACGAA
CTAGCTTTCC CGGCGGTCAT GTACAGCTGG ATGCTGCTGG TCGATTATGA CTTCGACGGC
CGGAAAGACA TTTTCACCAA CAGTTCGAAG GGCATCAGCG TATGGCATAA CGAATCGCAG
AACGGGACGG TATCGTTCAA ACTGGCAGTC GATCCGCTCC GAACGCTTGG CTTCAGTGGC
TTTCAGATCC CCCTTTACGT CAATGCGTCC GATCTGCCCG CTATTATGGA TTACGACGAC
GATGGCGACA TCGACATTAT CACCTTCGAT GCCGATGGCA ACATCATTGC CTACCAGCAA
AACATGAGTA TGGAGCGAAC CGGCACGAGA GGACTCGACT TTGCCCGCGC CGGTAATCAG
TGCTGGGGGC ATTTTCAAAA AGAGTTTTGC AACGACTTCA GATTTGGGAT CAATTGCGAC
GATGGCTCCG GCACCGGTGG GCGTCTGGCC GCTCCAACTG CTACCGGTCG AGTCAGCCCG
ACTAGTCCCA GCGGGGCAAG ACCGCTCCAT TCGGGTAACA CCCTCACGGT GATCGATACT
GATGGCGATG GTAAGAAAGA CTTGCTGTTC GGATTTGTAA GCTGTGAAAA CATTGCCCGC
CTGCGAAACA CCGGGCCCAA TAGCGTAAGT GCTAACTTCA CGAGTTACGA TAGCCTGTTT
CCCGCCCGAA ACCCCATTCT GTTTCCGGCC TTTCCGGCCA CTTTTTTTGA GGATGTCGAC
GGCGATGGGC AGAAAGATTT GCTCGCATCG CCCAATGTAA ACTTCAACGA CGGCAATGTC
TACGATTTTC GGGCGTCGGG CTGGTTTTAC AAGAATACGG GTACTACGCA AAAGCCCGAT
TTTCAGCTCA TTCAGAAAGA TTTCCTGCAA AGTGACATGC TCGACCTGGG CGAACGCACG
GCCCCCGCGC TGGCCGATCT GGATGGCGAC GGCGATATGG ATTTACTGGT CGGGTACGGC
GGGGTAGGGG TTGGCTCCGG CTACCGGGGA GGCATCTGGC AATTCGAGAA TAAGGGGACA
ACGCAAAATC CGGCTTTCGT GCTCGTCACA ACCGATTACC TGGGTATACA GTCGCTGGGG
CTGACAAACG TGGTGCCTTC TTTTGCCGAT GTGGATGCCA ATGGTAGTAT GGACCTGATC
GTCACCGCCA CGGGGAAACA GGCCGTAGAA ATTCGCGCGC TGATCAATAC CGCTCCCAAA
GGAGCTGCCG TCCAATACAG CCTTGCCAGT GCCACCCGCT GGCCCACGCC CGATCTGATG
TACCCGCTCG ATCTGCTGAC GGTTACGGAT GTCGACAAAG ACAACAAACC GGACTTACTG
ATTAGCCGGT ACAACGTGGG TACCATTCTC TATTACCGCA ATGCTGGCAC GGCCACGGCT
CCCGTTTTCC AGTTGCAGAA CCAGACGTTC GGTGGGATCA CGACGGACGA TTACATCTAC
GCCCGCGCCC GGTCGCTGGT GGTGGCCGAC CTGAACGGCG ATCAGAAAAA CGAACTCATT
GCCGCAGCCG ATAACGGTTC GGTTAAGGTC TATCAATTTC CCGAAACCCC GACTCAGGCG
TTTACGCTGA TCGACTCGCT GGCGGGCATA GGCTTGCCCG GCAAAGGACT TATTGCCGCA
GCCGCCGACC TCGACGGCGA CCAACTGCCC GATCTGTTGC TTGGTGGTAC GGGTGGCGGA
TTGCGCTATC TGAAAAACAC CTCCCAAAAG ATCGTTGTGA CCGGCCTACC CGAAGAACCG
ACCGGCCCAT GGGTGTTCCC CAACCCCACT AACCGGTACA TTACCGTTCG TCCGCACTAC
GATGGGCGCG TTGAACTGGT GTCTTTAACG GGCCAGACCG TGGTGCCCGT TCAGCCGGTT
AAAGCCGGGA CAGAAAGTCT CCTTGATTTA GGTGAGCTGG CCGATGGAAC GTATCTGATC
CGACTCCAGA GCGATAACCG CCCGGTACAA ATTCAGAAAG TGGTGGTCTG GAAATAA
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| Protein sequence | MKKLFTLCFL AIPFLTHAQS GGKIAFRYDQ SPTVSINNRP LLNPWVGGLN TTQYSTIRLN
NDTRDDLAVY DRTTGKVSTF IAVDNPIGSG TVWQYAPEYE LAFPAVMYSW MLLVDYDFDG
RKDIFTNSSK GISVWHNESQ NGTVSFKLAV DPLRTLGFSG FQIPLYVNAS DLPAIMDYDD
DGDIDIITFD ADGNIIAYQQ NMSMERTGTR GLDFARAGNQ CWGHFQKEFC NDFRFGINCD
DGSGTGGRLA APTATGRVSP TSPSGARPLH SGNTLTVIDT DGDGKKDLLF GFVSCENIAR
LRNTGPNSVS ANFTSYDSLF PARNPILFPA FPATFFEDVD GDGQKDLLAS PNVNFNDGNV
YDFRASGWFY KNTGTTQKPD FQLIQKDFLQ SDMLDLGERT APALADLDGD GDMDLLVGYG
GVGVGSGYRG GIWQFENKGT TQNPAFVLVT TDYLGIQSLG LTNVVPSFAD VDANGSMDLI
VTATGKQAVE IRALINTAPK GAAVQYSLAS ATRWPTPDLM YPLDLLTVTD VDKDNKPDLL
ISRYNVGTIL YYRNAGTATA PVFQLQNQTF GGITTDDYIY ARARSLVVAD LNGDQKNELI
AAADNGSVKV YQFPETPTQA FTLIDSLAGI GLPGKGLIAA AADLDGDQLP DLLLGGTGGG
LRYLKNTSQK IVVTGLPEEP TGPWVFPNPT NRYITVRPHY DGRVELVSLT GQTVVPVQPV
KAGTESLLDL GELADGTYLI RLQSDNRPVQ IQKVVVWK
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