Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4331 |
Symbol | |
ID | 8728091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 5251341 |
End bp | 5252456 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003389112 |
Protein GI | 284039182 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.248399 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.118283 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAATTG GGTTTACCGT TGATATACTG ATTGGACTGT TCATCATCAA CGTGGGGTTC TTTGCGGCCG GGCTGCTGTG GTTTTCACAT TATAACCGGC AGGCAAACCG ATTTCTGGCC TGTTTGATGG CTGCCCTGTC CTGCTGGCTG ATTGATGGCT TTTTTCGGTT AGCCGGGATT TATCAGCAAA ACCCCAATCT GTATTTCCTG CCCATCTTTT ATTCTTTTGC CTTTGGGCCG CTTATTTACA TCTACGTAAA CAGCCTCACC AACAGTGCTT TTCAGTTTAA ACGAAACTAC TGGTGGCATT TTCTGCCGGT CGCTGTTCAG GCAAGCCTTT ACCTGTTTCT GTCGTTGCAG TCGTACGAGT TCAGAAACTG GTTCTGGAAT AACGTTCATT ACCCGTACAC ATACAGCATT GAGTTTGATG GTACGCTGCT TTCCCTGCTT ATTTACCTAT TGCTTTCTCT GCGGTTGTTG CGTAAGTATA GCCGCTATGT TCAGGAGAAC TTCTCTGAAA CGAGCCAGCT TACCTTGCGG TGGCTTCGTG TATTACTGGT CATTATCGCG CTGGTTTGTA TTCAGTGGGC TATCGAATTG ATTTTGCGCC ATCGGTTCAA TCTGTATTTT CACTATGATT ACTCGTACTG GCTGCTTGGG TTGCTGCTCA TTGTGCTTGG TACGGCTGGT TTACAACAGA CTAATCTGGC CAACGTGCAG TTTAAGGACG AAGCTGTTCC TGATAGCCTG CCGTTGCTGC CCAGGAGTGA CGTTCAGGTT AGCCCTGAGC AGATTGCCCA GGTTCGCCGG GCTATGGACA CCGATAAACT CTACCTCAAT CCAACTCTGA CGCTCACTGA ACTGGCCCGC CATCTGGGGC TTAACCCCAA AGTCGTTTCG CAAATTATCA ATGCCGGCAT TGGCCAGTCA TTCAATAATT TTGTCAATTC CTATCGCATC AGCGAAGTGA AGCAGCGACT CCGCACCGAC GACCTGACCC GCTTCACACT GCTGGGTATC GCCTTCGAAT CGGGCTTTAA TTCCAAAACG ACCTTCAACC GAATCTTTAA GGAACACACG GGGCAGTCGC CCAGCGAGTA TGCTGGTCAA TCCTAG
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Protein sequence | MKIGFTVDIL IGLFIINVGF FAAGLLWFSH YNRQANRFLA CLMAALSCWL IDGFFRLAGI YQQNPNLYFL PIFYSFAFGP LIYIYVNSLT NSAFQFKRNY WWHFLPVAVQ ASLYLFLSLQ SYEFRNWFWN NVHYPYTYSI EFDGTLLSLL IYLLLSLRLL RKYSRYVQEN FSETSQLTLR WLRVLLVIIA LVCIQWAIEL ILRHRFNLYF HYDYSYWLLG LLLIVLGTAG LQQTNLANVQ FKDEAVPDSL PLLPRSDVQV SPEQIAQVRR AMDTDKLYLN PTLTLTELAR HLGLNPKVVS QIINAGIGQS FNNFVNSYRI SEVKQRLRTD DLTRFTLLGI AFESGFNSKT TFNRIFKEHT GQSPSEYAGQ S
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