| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4281 |
|---|
| Symbol | |
|---|
| ID | 8728040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 5164451 |
|---|
| End bp | 5165551 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | GTP-binding protein YchF |
|---|
| Protein accession | YP_003389064 |
|---|
| Protein GI | 284039134 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTTC AATGTGGAAT CGTGGGTTTG CCGAATGTGG GCAAATCAAC GCTGTTTAAC
GCAATATCAA GCGGAAAGGC CGAAGCTGCC AACTACCCCT TCTGCACAAT AGAGCCCAAC
GTGGGCGTAG TAACCGTACC CGACGAACGT CTGGATACCC TCGAAAGTCT GGTGAAACCC
CAGCGAGTGG TGCCAACCAT TATCGAGTTT GTCGACATCG CCGGTCTGGT AAAGGGAGCC
AGCCAGGGCG CCGGTCTGGG CAATAAATTC CTGGCCAACA TTCGTGAAGT GGATGCCATT
GTCCATGTGA TCCGATGCTT TGAGGATGAT AACATTGTTC ACGTTGAAGG CAAGGTCGAT
CCAATATCGG ATAAAGAAAT CATCGATGCA GAATTGCAGC TGAAGGATTT AGAGGCCGTT
GATAAGAAGA TTCAGAAAAT TGCCAAAGCA GCTCAGGTTG GCGATGCCAA GGCCAAAGCT
GAGTTGGCCA TTCTGAAAGA ATACAAATCA ACCCTCGAAG CAGGCAAGAG TGCCCGCACC
GTTCAGGTGT CTCCGGAAGA AAAGGAAGCC GCCATCGGCG ATATTGCCCT GCTAACGGTG
AAGCCCGTTA TTTACGTAGC TAACGTCGAC GAAGGGTCAC TACCCAACGG AAACGCCTAC
TCTGATAAAC TCAAAGAAGC GGTGAAAGAT GAAGGGGCGG AAGTAATTAT CATCAGTGCC
GGTATCGAAT CGCAGATTGC CGAAATGGAA GACCCCGAAG AGCGGGAGCT GTTCCTGGGC
GAATATGGCC TGACCGAATC GGGTTTGAGC CAGCTCATTA AGGCATCGTA CCGACTGCTG
GGCCTGATTA CCTACTTTAC GGCGGGCGTT AAAGAAGTTC GTGCCTGGAC CATCCACCGG
GGTTGGAAAG CGCCACAGGC CGCCGGAGTG ATTCACTCCG ACTTTGAAAA GAAGTTCATT
CGGGCGCAGG TCATGAAACT CCCCGATTTT ACGCAGTTCA AAACCGAAGC GGGTGTACGG
GAAGCCGGAA AACTGTCCGT AGAAGGTAAA GAATACGTCG TACAGGACGG CGACATCATG
GAATTCCTGC ACAGCGCCTA G
|
|---|
| Protein sequence | MGLQCGIVGL PNVGKSTLFN AISSGKAEAA NYPFCTIEPN VGVVTVPDER LDTLESLVKP
QRVVPTIIEF VDIAGLVKGA SQGAGLGNKF LANIREVDAI VHVIRCFEDD NIVHVEGKVD
PISDKEIIDA ELQLKDLEAV DKKIQKIAKA AQVGDAKAKA ELAILKEYKS TLEAGKSART
VQVSPEEKEA AIGDIALLTV KPVIYVANVD EGSLPNGNAY SDKLKEAVKD EGAEVIIISA
GIESQIAEME DPEERELFLG EYGLTESGLS QLIKASYRLL GLITYFTAGV KEVRAWTIHR
GWKAPQAAGV IHSDFEKKFI RAQVMKLPDF TQFKTEAGVR EAGKLSVEGK EYVVQDGDIM
EFLHSA
|
|---|
| |