Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4248 |
Symbol | |
ID | 8728007 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 5126746 |
End bp | 5127297 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | beta-Ig-H3/fasciclin |
Protein accession | YP_003389031 |
Protein GI | 284039101 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC TTAAATTAAT TTTCTCAATT GTTGCTTTAT CAGCTATCAG TCAGGTTTCG TTCGCGCAGG AAAAAACGGT AACCGTTGGT GGCGCGCCAA TGTATCCCTC AAAAAATATC ATTGAGAACG CCGTAAATTC TAAAGACCAC ACAACACTGG TAGCCGCCGT TAAAGCAGCC GGTTTAGTTG AAACCCTGTC GGGTGCGGGT CCCTTCACGG TGTTTGCACC TACCAACAAA GCGTTCGATA AACTGCCAAA AGGCACAGTG GAAACGCTGG TGAAGCCCGA GAACAAACAA ACACTGACGG GTATTCTAAC CTACCATGTT GTAGCCGGTA AAATGAGTAC CGCCGACCTG ATGAAGGCCA TCAAAGATGG AGGTGGAAAA GCTACTCTGA GCACAGTTTC AGGCGGAACA CTAACGGCCA TGCAGAAAGG CAAAAAGATT GAACTGATGG ACGCCAAAGG GGGTACATCG ACCGTTACCA TTGCCGACGT GAACCAGTCG AACGGCGTAA TTCACGTAAT CGACACGGTA TTGATGCCGT AA
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Protein sequence | MKTLKLIFSI VALSAISQVS FAQEKTVTVG GAPMYPSKNI IENAVNSKDH TTLVAAVKAA GLVETLSGAG PFTVFAPTNK AFDKLPKGTV ETLVKPENKQ TLTGILTYHV VAGKMSTADL MKAIKDGGGK ATLSTVSGGT LTAMQKGKKI ELMDAKGGTS TVTIADVNQS NGVIHVIDTV LMP
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