Gene Slin_4248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4248 
Symbol 
ID8728007 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5126746 
End bp5127297 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content48% 
IMG OID 
Productbeta-Ig-H3/fasciclin 
Protein accessionYP_003389031 
Protein GI284039101 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TTAAATTAAT TTTCTCAATT GTTGCTTTAT CAGCTATCAG TCAGGTTTCG 
TTCGCGCAGG AAAAAACGGT AACCGTTGGT GGCGCGCCAA TGTATCCCTC AAAAAATATC
ATTGAGAACG CCGTAAATTC TAAAGACCAC ACAACACTGG TAGCCGCCGT TAAAGCAGCC
GGTTTAGTTG AAACCCTGTC GGGTGCGGGT CCCTTCACGG TGTTTGCACC TACCAACAAA
GCGTTCGATA AACTGCCAAA AGGCACAGTG GAAACGCTGG TGAAGCCCGA GAACAAACAA
ACACTGACGG GTATTCTAAC CTACCATGTT GTAGCCGGTA AAATGAGTAC CGCCGACCTG
ATGAAGGCCA TCAAAGATGG AGGTGGAAAA GCTACTCTGA GCACAGTTTC AGGCGGAACA
CTAACGGCCA TGCAGAAAGG CAAAAAGATT GAACTGATGG ACGCCAAAGG GGGTACATCG
ACCGTTACCA TTGCCGACGT GAACCAGTCG AACGGCGTAA TTCACGTAAT CGACACGGTA
TTGATGCCGT AA
 
Protein sequence
MKTLKLIFSI VALSAISQVS FAQEKTVTVG GAPMYPSKNI IENAVNSKDH TTLVAAVKAA 
GLVETLSGAG PFTVFAPTNK AFDKLPKGTV ETLVKPENKQ TLTGILTYHV VAGKMSTADL
MKAIKDGGGK ATLSTVSGGT LTAMQKGKKI ELMDAKGGTS TVTIADVNQS NGVIHVIDTV
LMP