| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4122 |
|---|
| Symbol | |
|---|
| ID | 8727881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 4969329 |
|---|
| End bp | 4970054 |
|---|
| Gene Length | 726 bp |
|---|
| Protein Length | 241 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003388908 |
|---|
| Protein GI | 284038978 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000002243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00000977618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTTCTTAA GAACGGCATT AAGACGAGGG CATCACGTAG TTAGCCGAGC CTCATCTAGG
AGCTACGGAC AGTCCCTAAA ACCAAGAGCA GAAATGCCTG GTCAACAGGG TGTGCTTCGC
AAGAAAGATC CGGCACATGA GTATTGGGAG AAACGCGGGC AGGGAACCTG GAATATAAGC
CGGGGAATAC GGGAAGCATT CTGGGGCGTA AAAGGATATA ATATGAGTCA TTTTGTTGTC
CCGAAATCAA AAGCCATAGC TGAAGTTCGT CGTGACCCTG CGCGAGCAAA CTGGGATAAG
GAACTAAAGA GAATGAGGGT TAAATACCCA CATCTGTCAT TCTTAATTGA CCAATGGCGT
TTACAGAATC GGGCTCAGGC CTTAGGGGGA AATCCGCTGC CGGTTAAAGC CGGAAGGATA
ATGCTTGAAG GCCTGGAGCG GATGGGTCGT GCAACCACTT TAACAGGAAA ACTCGGAGGG
CATTGGTATG CTCAAATTTA TTCGTTAGGA AACGAAGGAT TTAGAGGAGG AGCATCTTAT
TTCATGCATG CACTAGCTAT CCCGTGGCAA TGGCCAGGAA TTGCCACCCG GCACTTCTTC
AGTAAATATT TCAACATCCC GGAAAATTTC CATCCAATCA GAATAGCTGG TAGAATGGCT
GGCCGTAAAG TAATAACATG GAAGAGAGGG AGGAAGTATA AAGCAAAGAA CAGGGGGAAT
AAGTAA
|
|---|
| Protein sequence | MFLRTALRRG HHVVSRASSR SYGQSLKPRA EMPGQQGVLR KKDPAHEYWE KRGQGTWNIS
RGIREAFWGV KGYNMSHFVV PKSKAIAEVR RDPARANWDK ELKRMRVKYP HLSFLIDQWR
LQNRAQALGG NPLPVKAGRI MLEGLERMGR ATTLTGKLGG HWYAQIYSLG NEGFRGGASY
FMHALAIPWQ WPGIATRHFF SKYFNIPENF HPIRIAGRMA GRKVITWKRG RKYKAKNRGN
K
|
|---|
| |