Gene Slin_4051 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4051 
Symbol 
ID8727809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4868573 
End bp4869715 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID 
ProductCysteine desulfurase 
Protein accessionYP_003388838 
Protein GI284038908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0863916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.93961 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCA TTTATCTCGA TAATAATGCC ACTACACGGG TCGCGCCAGA GGTATTGAAT 
GCGATGCTGC CGTATTTGTC AGATTATTAC GGTAATGCGG CTAGTTCGCA TGGGTTCGGC
AAGACGATAA ATGATGCTGT TAAATTAGCA CGTGCTCAGG TGGCCGATTT GATAGGTTGC
CAGTCAACAG AAATAGTATT CACCTCCGGG GCTACTGAGT CTATTAATTT AGCTATTAAA
GGAGTTGCTG AAAGCTACCA GAATAAGGGC CGACATATTA TTACGGTTCA AACTGAGCAT
CCTGCGGTAT TAGATGTTTG CCGATTCCTG GAGTCTCACG GCTATGAGCT GACGTATCTA
TCTGTCGGTC GTGATGGCTT AATTGACCTT TCTGAACTTG ACGCTCACCT TCGTTCTGAC
ACGATTTTAG TGTCTGTCAT GGCCGTTAAC AATGAGACAG GCGTACAGCA GCCAATACAG
CAAATTGCTG AACGAGCGCA TCGTGTCGGT GCTCTTTTTA TGTCTGATGC TACACAGGCA
GTAGGTAAAG TCCCCATCTT AGTTGACGAG TACGATATCG ATATTTTGGC CTTCTCCGCT
CACAAGTTTT ATGGTCCAAA AGGCGTTGGA GGCTTATTTA TCCGGCAACG TTCGCCAAGG
CGGGTAAAAG TCGAGGCTAC TATGCACGGC GGAGGACACG AAAGAGGTTT GCGCAGTGGT
ACCCTGAATG TGCCAGGTAT TGTTGGTTTG GGCAAAGCTT GTGAATTGGC GGTAGCCGAA
ATGAGGAATG ATGCTGTTCG GGTTGGTACT CTTCGGGATA AACTGGAAAT AGACCTACTC
AAATCAGATG GTTCATTTGT TAATGGCGAT GCGAAGAGTC GCTTATACAA TGTCACAAAC
ATTAGTTTCC CTGACGTGGA CGCTAATGTG TTGATTGGTC AGTTAAAAAA ACTAGCCGTA
TCAAATGGTT CAGCCTGTTC ATCGGCTGTG TTTGAACCAT CCTATGTATT GAAAGCAATG
GGATTGACGG ATGATGAAGC GCTAGGGGCT ATTCGATTTT CTCTTGGGCG GTATACTACT
GAAGAAGACA TACAGGGAGC GGTTGAGGCC ATAAAACAAA CCATTCATGC TGTCCGATAT
TGA
 
Protein sequence
MDFIYLDNNA TTRVAPEVLN AMLPYLSDYY GNAASSHGFG KTINDAVKLA RAQVADLIGC 
QSTEIVFTSG ATESINLAIK GVAESYQNKG RHIITVQTEH PAVLDVCRFL ESHGYELTYL
SVGRDGLIDL SELDAHLRSD TILVSVMAVN NETGVQQPIQ QIAERAHRVG ALFMSDATQA
VGKVPILVDE YDIDILAFSA HKFYGPKGVG GLFIRQRSPR RVKVEATMHG GGHERGLRSG
TLNVPGIVGL GKACELAVAE MRNDAVRVGT LRDKLEIDLL KSDGSFVNGD AKSRLYNVTN
ISFPDVDANV LIGQLKKLAV SNGSACSSAV FEPSYVLKAM GLTDDEALGA IRFSLGRYTT
EEDIQGAVEA IKQTIHAVRY