Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_4051 |
Symbol | |
ID | 8727809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4868573 |
End bp | 4869715 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | |
Product | Cysteine desulfurase |
Protein accession | YP_003388838 |
Protein GI | 284038908 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0863916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 0.93961 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATTTCA TTTATCTCGA TAATAATGCC ACTACACGGG TCGCGCCAGA GGTATTGAAT GCGATGCTGC CGTATTTGTC AGATTATTAC GGTAATGCGG CTAGTTCGCA TGGGTTCGGC AAGACGATAA ATGATGCTGT TAAATTAGCA CGTGCTCAGG TGGCCGATTT GATAGGTTGC CAGTCAACAG AAATAGTATT CACCTCCGGG GCTACTGAGT CTATTAATTT AGCTATTAAA GGAGTTGCTG AAAGCTACCA GAATAAGGGC CGACATATTA TTACGGTTCA AACTGAGCAT CCTGCGGTAT TAGATGTTTG CCGATTCCTG GAGTCTCACG GCTATGAGCT GACGTATCTA TCTGTCGGTC GTGATGGCTT AATTGACCTT TCTGAACTTG ACGCTCACCT TCGTTCTGAC ACGATTTTAG TGTCTGTCAT GGCCGTTAAC AATGAGACAG GCGTACAGCA GCCAATACAG CAAATTGCTG AACGAGCGCA TCGTGTCGGT GCTCTTTTTA TGTCTGATGC TACACAGGCA GTAGGTAAAG TCCCCATCTT AGTTGACGAG TACGATATCG ATATTTTGGC CTTCTCCGCT CACAAGTTTT ATGGTCCAAA AGGCGTTGGA GGCTTATTTA TCCGGCAACG TTCGCCAAGG CGGGTAAAAG TCGAGGCTAC TATGCACGGC GGAGGACACG AAAGAGGTTT GCGCAGTGGT ACCCTGAATG TGCCAGGTAT TGTTGGTTTG GGCAAAGCTT GTGAATTGGC GGTAGCCGAA ATGAGGAATG ATGCTGTTCG GGTTGGTACT CTTCGGGATA AACTGGAAAT AGACCTACTC AAATCAGATG GTTCATTTGT TAATGGCGAT GCGAAGAGTC GCTTATACAA TGTCACAAAC ATTAGTTTCC CTGACGTGGA CGCTAATGTG TTGATTGGTC AGTTAAAAAA ACTAGCCGTA TCAAATGGTT CAGCCTGTTC ATCGGCTGTG TTTGAACCAT CCTATGTATT GAAAGCAATG GGATTGACGG ATGATGAAGC GCTAGGGGCT ATTCGATTTT CTCTTGGGCG GTATACTACT GAAGAAGACA TACAGGGAGC GGTTGAGGCC ATAAAACAAA CCATTCATGC TGTCCGATAT TGA
|
Protein sequence | MDFIYLDNNA TTRVAPEVLN AMLPYLSDYY GNAASSHGFG KTINDAVKLA RAQVADLIGC QSTEIVFTSG ATESINLAIK GVAESYQNKG RHIITVQTEH PAVLDVCRFL ESHGYELTYL SVGRDGLIDL SELDAHLRSD TILVSVMAVN NETGVQQPIQ QIAERAHRVG ALFMSDATQA VGKVPILVDE YDIDILAFSA HKFYGPKGVG GLFIRQRSPR RVKVEATMHG GGHERGLRSG TLNVPGIVGL GKACELAVAE MRNDAVRVGT LRDKLEIDLL KSDGSFVNGD AKSRLYNVTN ISFPDVDANV LIGQLKKLAV SNGSACSSAV FEPSYVLKAM GLTDDEALGA IRFSLGRYTT EEDIQGAVEA IKQTIHAVRY
|
| |