| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_4039 |
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| Symbol | |
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| ID | 8727797 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4854062 |
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| End bp | 4856497 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | glycoside hydrolase family 2 sugar binding protein |
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| Protein accession | YP_003388828 |
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| Protein GI | 284038898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.115808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA AGCTGCTGGC TTTAAGTGTA CTGATCGCCA GTCAATCGCT GGCCCAGCCC
GGCCCAACCC GAACGCGCCT TTTGGATGCC GACTGGTATT TTTTTAGAGA CAGTACCGCT
GCTGGCCAGC AACCTGCCTT CAAGGAGTCA ACCTGGCGAA AGCTGAGCCT GCCGCATGAC
TGGAGTATCG AGGATTTATC CCACCAGTCG CCGGATCAGG TAATGGGCCC ATTTTCGCGG
GCGAGTGTGG GTACTACTTC CACTGGCTAC ACCGTTGGCG GAACGGGCTG GTATCGTAAA
ACATTTGTCC TGAATCGCTA CGACGCCGGT AAAATAGCCC GTATTCAGTT TGATGGTGTG
TACATGGAGT CTGATGTGTG GCTCAACGGC CACCATCTCG GGTATCACCC GAACGGTTAC
ACCTCATTCA GCTACGAGCT GACACCCTGG CTCCTGCCCA CGGGACAAGC CAACACACTG
GTTGTTCGAG TGAAAAACCT CGGCCAGAAT ACTCGTTGGT ATACGGGCTC GGGCATCTAC
CGGCACGTGT GGTTAATCCT GACCGAAGCC GTGCACATCG CGCCGATGGG CGTAACGATT
ACGACCCCGC AGGTGTTGGC CCGGTCTGCT CAGATAGTGG TCAGGACACA AATTGACAAT
ACGCAAAACG CAGCTTTACC CGTTCGGGTC ATAACAACCC TGGTCAAGCC AAATGGGCAG
ATGGCAGGGA GAGATGAGCA GGTATTGACG GTAGCGGGCA ACGGAAACGC CGAACGTTCG
CAAACCCTGA TAGTAGCTAG TCCGGCAGTA TGGTCGCCCG AATCGCCATC GCTATACCGG
GCCAACGTGG TGCTGGTGTC CGGTACGAAA CGGTTGGATA GTGTAACCAC CTCCTTTGGG
ATTCGCTCCG TTGAGTTCGA TGCCAGGCGC GGCTTTGTTC TGAACGGCAA ACGGCTTTTG
CTCAAAGGTG GCAGTGTTCA CCACGACAAT GGCCCGTTGG GGGCCAGCGC CTTTGACCGG
GCCGAAGAAC GAAAAGTCGA ACTGCTGAAA GCCAATGGTT TCAACGCCGT TCGCACCAGC
CATAACCCAC CGTCGCCCGC TTTTCTGGAC GCCTGCGACC GGCTGGGTTT GCTGGTCGTT
GAAGAAGCTT TCGATATGTG GCAGCGTCCC AAAAAACCAC AGGACTACCA CCTTTTCTTC
GACCAGTGGT GGCGTACCGA CTTACGGGCC ATGATCGAGC GCGACCGCAA CCACCCGTCC
GTATTCTTGT GGAGCATCGG CAACGAAATC AACGAACGAG CCGACCCGTC GGGACTGGTG
TTGACGAAAC AGTTGGCCGA TGAAGCACAC CGACTCGACC CCAGCCGCCC GATTATGGAG
GCTATGTGTG TGTTCTGGGA GCATCCCGGC AAGGTGTGGG AAGACGGCGA CAAAGCCTTT
GCGCTGTTGG ATGTAGGTGG CTACAACTAC GAATGGAAGC ACTACGAGTC AGACCACCAG
CGCCATCCGG ACCGGGTCAT GCTCGGCACG GAGTCTTTTG CCCGCGAAGC CTACCAAAAC
TGGCAGCAGG TAGAAAAGCA CCCGTATGTG CTTGGCGATT TCGTCTGGAC GGTTATGGAT
TACATGGGCG AAACGGCCAT CGGCCATGCG TTGATCCAGC CCAAAGCCGA GAAAGACAGT
GTGAAGGCGG TGTTGCCGTG GCCGTGGTTC AATGCTTGGT GTGGCGATCT GGATTTGATC
GGTACGAAAA AGCCGCAGTC GTACTACCGC GATGTTGTCT GGCGCAACAG CCCCGTCGAG
ATGGCCGTTC ATAGCCCTAT CCCCGACGGT ATGAAAGAAA CCGTTACTAA CTGGGGCTGG
CCCGATGAGC ATCAGAGCTG GTCGTGGCCG GGGCAGGAGG GGAGACTCTT TCAGGTGCGT
GTCTTTTCGC GCAGTCCGCT GGTTCGGCTG GAACTCAATG GAAAACTGGT GGGGGAACAG
CAACTGGCAG ATACCACCAT TACGGCTTCG TTTACCGTGC CTTACCAGCC GGGCGTGCTC
AAGGCAACGA GCTTTGCCAA CGGTAAATTA ACGGGATCGG TAACCTTCCG TACAACGGGG
AAACCCCACC ACCTTCGGCT CAGAACCGAC CGCCCGGCCA TACACCCCGC CCGCCATGAC
CTGGCCTATG TGACGGTTGA GGTGGTAGAC GATCAGGGGC AGGTAGTACC CTGGCAGGAT
GTGCCCATCG CCTTTCAGCT CACCGGTGCT GGTGTACTGG CGGGGGTAGG CAACGGAAAC
CCAACGGATG TAAGCAGCTT TCAACAGCCC CGGAAGTCAA CGTTTCGGGG GCGCTGTCTG
GCCATTGTGA GGTCAGGAGG AAAGCCCGGC ACGATCACCT TCGAAGCGAG CAGCCCAACG
CTTGGAACGG CTCAGCTGAC CTTACAGGTG AACTAA
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| Protein sequence | MKIKLLALSV LIASQSLAQP GPTRTRLLDA DWYFFRDSTA AGQQPAFKES TWRKLSLPHD
WSIEDLSHQS PDQVMGPFSR ASVGTTSTGY TVGGTGWYRK TFVLNRYDAG KIARIQFDGV
YMESDVWLNG HHLGYHPNGY TSFSYELTPW LLPTGQANTL VVRVKNLGQN TRWYTGSGIY
RHVWLILTEA VHIAPMGVTI TTPQVLARSA QIVVRTQIDN TQNAALPVRV ITTLVKPNGQ
MAGRDEQVLT VAGNGNAERS QTLIVASPAV WSPESPSLYR ANVVLVSGTK RLDSVTTSFG
IRSVEFDARR GFVLNGKRLL LKGGSVHHDN GPLGASAFDR AEERKVELLK ANGFNAVRTS
HNPPSPAFLD ACDRLGLLVV EEAFDMWQRP KKPQDYHLFF DQWWRTDLRA MIERDRNHPS
VFLWSIGNEI NERADPSGLV LTKQLADEAH RLDPSRPIME AMCVFWEHPG KVWEDGDKAF
ALLDVGGYNY EWKHYESDHQ RHPDRVMLGT ESFAREAYQN WQQVEKHPYV LGDFVWTVMD
YMGETAIGHA LIQPKAEKDS VKAVLPWPWF NAWCGDLDLI GTKKPQSYYR DVVWRNSPVE
MAVHSPIPDG MKETVTNWGW PDEHQSWSWP GQEGRLFQVR VFSRSPLVRL ELNGKLVGEQ
QLADTTITAS FTVPYQPGVL KATSFANGKL TGSVTFRTTG KPHHLRLRTD RPAIHPARHD
LAYVTVEVVD DQGQVVPWQD VPIAFQLTGA GVLAGVGNGN PTDVSSFQQP RKSTFRGRCL
AIVRSGGKPG TITFEASSPT LGTAQLTLQV N
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