Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3999 |
Symbol | |
ID | 8727757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4811174 |
End bp | 4811863 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_003388788 |
Protein GI | 284038858 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.815808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000000557769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTACAAGC ACCTTTTTTT TGACCTGGAT CATACGCTCT GGGACTTTGA CCGTAACTCG GCCGAGTGTA TTACCGAGCT GTATGACACA TTTCGGCTGG CCGATCTGGG CATTGAATCC GCAGCTGAGT TCAGTCGCCA GTTTATTGCA ATAAACCGGC AGTTGTGGGC CGACTTCGAC AAGAATCTCA TTGAACACAC CTACATTAGA AAACACCGGT TCCCGCTGGT ATTTCGGGCG ATGGGCGTCG ATGAGTCGGC CGTTCATGCC GACCTGAATG TAGAATATCT GAAGCTGTTG CCCCGTAAAC CTCATTTACT GGAGTCGGCG AAAGAGCTGC TGGATCACCT GAACGGGCGC TATACGATGC ATATTATCAC CAATGGCTTT GCCGAAATTC AGGCCGTAAA AATGGATAGC GCCGAAATCG CGCACTATTT TACGCATGTC ATCACGAGCG AGAACGCGAA TGCCAAAAAG CCGGATCCGC TGGTGTTTCA GTACGCCATG GAAATCAGCG GAACCAACGC GTCGGAAAGC CTGATGATTG GTGATAATTA CGAAGCGGAC ATTATGGGGG CAAAAGGCGT TGGTCTGGAC ACCGTTTTTT ATAACCCGCA GGGGCAACCG GTCAGCGACC CGCCTACCTA CGATATCCGT CACTGGAAAG AACTAATGGC TATCTTGTAA
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Protein sequence | MYKHLFFDLD HTLWDFDRNS AECITELYDT FRLADLGIES AAEFSRQFIA INRQLWADFD KNLIEHTYIR KHRFPLVFRA MGVDESAVHA DLNVEYLKLL PRKPHLLESA KELLDHLNGR YTMHIITNGF AEIQAVKMDS AEIAHYFTHV ITSENANAKK PDPLVFQYAM EISGTNASES LMIGDNYEAD IMGAKGVGLD TVFYNPQGQP VSDPPTYDIR HWKELMAIL
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