Gene Slin_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3999 
Symbol 
ID8727757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4811174 
End bp4811863 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content50% 
IMG OID 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_003388788 
Protein GI284038858 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.815808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000557769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTACAAGC ACCTTTTTTT TGACCTGGAT CATACGCTCT GGGACTTTGA CCGTAACTCG 
GCCGAGTGTA TTACCGAGCT GTATGACACA TTTCGGCTGG CCGATCTGGG CATTGAATCC
GCAGCTGAGT TCAGTCGCCA GTTTATTGCA ATAAACCGGC AGTTGTGGGC CGACTTCGAC
AAGAATCTCA TTGAACACAC CTACATTAGA AAACACCGGT TCCCGCTGGT ATTTCGGGCG
ATGGGCGTCG ATGAGTCGGC CGTTCATGCC GACCTGAATG TAGAATATCT GAAGCTGTTG
CCCCGTAAAC CTCATTTACT GGAGTCGGCG AAAGAGCTGC TGGATCACCT GAACGGGCGC
TATACGATGC ATATTATCAC CAATGGCTTT GCCGAAATTC AGGCCGTAAA AATGGATAGC
GCCGAAATCG CGCACTATTT TACGCATGTC ATCACGAGCG AGAACGCGAA TGCCAAAAAG
CCGGATCCGC TGGTGTTTCA GTACGCCATG GAAATCAGCG GAACCAACGC GTCGGAAAGC
CTGATGATTG GTGATAATTA CGAAGCGGAC ATTATGGGGG CAAAAGGCGT TGGTCTGGAC
ACCGTTTTTT ATAACCCGCA GGGGCAACCG GTCAGCGACC CGCCTACCTA CGATATCCGT
CACTGGAAAG AACTAATGGC TATCTTGTAA
 
Protein sequence
MYKHLFFDLD HTLWDFDRNS AECITELYDT FRLADLGIES AAEFSRQFIA INRQLWADFD 
KNLIEHTYIR KHRFPLVFRA MGVDESAVHA DLNVEYLKLL PRKPHLLESA KELLDHLNGR
YTMHIITNGF AEIQAVKMDS AEIAHYFTHV ITSENANAKK PDPLVFQYAM EISGTNASES
LMIGDNYEAD IMGAKGVGLD TVFYNPQGQP VSDPPTYDIR HWKELMAIL