| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3988 |
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| Symbol | |
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| ID | 8727746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 4794933 |
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| End bp | 4796261 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003388777 |
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| Protein GI | 284038847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.74321 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0290381 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAAG TAATCGGCAA AGACAAAAAG ACGCGGGTGC GCTACAGCAT GCTGGCACTG
GTCTTCATCA ACGTAGTGAT CAACTACCTC GACCGGAGCA ATATTTCGGT GGCGGGGACT
GCGCTGAGTA AAGACATGGA CCTGTCGTCG GAACAGTTGG GGTTCATTTT CTCGGCTTTT
GGCTGGACCT ACGCCCTGCT ACAAATACCG GGCGGCCTTA TCGCCGACCG CTTTGGTCCC
CGCATTCTCT ATGCATTTTG TCTGATTACC TGGTCCTTGG CCACCGTTTG TCAGGGCTTT
GTTCGGGGGT TTGCCAGTCT GTTTTCGCTT AGGCTGGCAA CGGGCGCGTT TGAAGCCCCT
TCCTACCCCA TCAACAACCG CATTGTTACA AGCTGGTTTC CCGAACACGA ACGGGCTTCG
TCTATTGCCT TGTATGTTTC GGGACAGTTT ATCGGCCTTG CGTTTTTAAC ACCCGTACTG
ACTTATATCC AGAGTCAGTT CGGGTGGCAG GGTTTGTTCG TGTGTACCGG TATCGTTGGG
CTGATCTGGG GCGTTATCTG GTACCTCTTT TACCGCGACC CGCTCGATCA TCCGAAGGTG
AACGACGCCG AGCTGGCCTA CATCGAAGAA GGGGGTGGCC TGTTCAGAAG TCGGCAGGCG
GGTACGAATA AAGCGTCTGT CTGGAGCTGG GTAAACGTGA AGCAGGTGTT TTCCTCCCGC
ACGTTATGGG GAGTTTACAT CGGGCAGTTT GCCGTTAACT CCATGCTCTG GTTCTTCCTG
ACCTGGTTCC CCACCTATCT GGTCAAATAC CGGGGGCTGG ATTTCATCAA GTCGGGCTAT
CTGGCATCGG TACCTTTTCT GGCGGCCTGT GCGGGTCTGC TCCTCTCCGG CTTCGTCTCC
GACAGACTGG TGAAGCAGGG GAAATCGGTA ACGATGGCGC GTAAAGCACC GATCATCATC
GGTCTGCTGC TGTCGATCAG TATTGTCGGG GCCAATTACA CGAACGATAC CGCATTGATC
ATCGCCTTTA TGGCTTTGGC TTTCTTTGGC TCGGGTATGG CGTTGATCTC CTGGGTGTTC
GTATCTATTC TATCACCCAA ACATCTGATT GGTCTAACCG GTGGCGTGTT CAATTTCATG
GGCAATCTGG CGTCCATCGT AGTACCTATC GTGATTGGCT ATCTGGCCAA AGACGGTGAT
TTCAAACCAG CGCTCGTCTT CGTCGGCGCC CTGGGCCTGA TTGGAGCCTG TTCTTACATA
TTCCTGGTGG GCAAAATAGA ACGGGTCGTG ACTCATGACC CGCAGGAAGG GGTCTTTGCG
GGGGAGTAA
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| Protein sequence | MEQVIGKDKK TRVRYSMLAL VFINVVINYL DRSNISVAGT ALSKDMDLSS EQLGFIFSAF
GWTYALLQIP GGLIADRFGP RILYAFCLIT WSLATVCQGF VRGFASLFSL RLATGAFEAP
SYPINNRIVT SWFPEHERAS SIALYVSGQF IGLAFLTPVL TYIQSQFGWQ GLFVCTGIVG
LIWGVIWYLF YRDPLDHPKV NDAELAYIEE GGGLFRSRQA GTNKASVWSW VNVKQVFSSR
TLWGVYIGQF AVNSMLWFFL TWFPTYLVKY RGLDFIKSGY LASVPFLAAC AGLLLSGFVS
DRLVKQGKSV TMARKAPIII GLLLSISIVG ANYTNDTALI IAFMALAFFG SGMALISWVF
VSILSPKHLI GLTGGVFNFM GNLASIVVPI VIGYLAKDGD FKPALVFVGA LGLIGACSYI
FLVGKIERVV THDPQEGVFA GE
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