Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3979 |
Symbol | |
ID | 8727737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4781503 |
End bp | 4783056 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003388768 |
Protein GI | 284038838 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0019717 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGCT ATAAAACGAT AGTACGAAAA ACAGTCGTGG CGGCCTTCCT TTCGGCCCCG TTGTTCTGGG CTACTGGCTG TACCAAAAAT TTCGATGAGA TCAACACCAA CCAAACCAAA ATAACCATTA TTGGTGCGGG CGAAATTCCT TACCTGTTCT CGAAAGCACA GTCGGCGGCA ACGCTTCCCG GCGGCAACTA TCAGGTTGGT CAGAATCTCT TCTCCGATCA GTATGCGCAG TATTTTGCCT GCGTCGCTAC GTACTTCCCC TCCGACCGGT TTGTGATTCG GATGGATTGG CTGGGTGGCC CCTGGACATC GCTTTACACC CAGGTTGTTC CTCAGTTGAA AACGATCATG TCCAGTGCCG ATCCCAATTC GGCGGAGTAT GCCCTGGCCA GCATCTGGTG GGTGTATTCG TTTCACCGCT GGACGGATTA TGTTGGTCCG ATTCCGTATT TCAAAGCGGG CGAACCGGCT ACCTCGGTAC CGTATGATCC TCAGGATAAA ATATACGATG ATTTTTTCAA ACGGCTGGCG GCTGCTACAA CGGTCCTAAA AGCTAAAACG GCAGAAAAAC CCTTTGGTGC TTTTGACCTG ATCTACGGCG GTGATGCCAC CAAGTGGATC AAGTTCGCCA ATACGCTTCG GCTGCGCTTA GCCTTACGTA TCTCGAAAGT TGACCCGGCC CGCGCCAAAA CGGAAGCCGA AGCCGCAGTG GCGGGCGGTG TGCTGACCAC CAGCCCCGAC GACGACGCAC TGGTGCAACG CAGTACCAAA GGGGGCGACA ACAATGGGCT GGCGATTATG TCGGACTGGA ACGAGTTTCG GATGAGTGCG GCCATGGAAT CGGTCCTGAA AGGCTACGAA GACCCACGGC TACCAACCTA CTTTTTGCCC GCTGTAAAAA CCAATACGTA CGAAGGACTT CGGAATGGAC TGGGCACAAC GCAGTTGACC GAAACCGTCA ACACGGCCGA TTACAACTCG CACGTGGGTC AGCGCTGGAC ATCGACCGGG TTAGGAACGG CTCAAAACGT AATGGCTACA GCTGAATCCT ATTTCCTGCG GGCAGAGGGT GCCCTCAACG GCTGGAACAT GGGCGGCACG GCAAAGGATT TTTACCTTCA GGGCATCGCT AATTCCATGA AACAGTGGGG CGTTAGCGAT GCAGCGGCTA TTGCAGCCTA CCAGAACAGC ACAAAAACGC CTATTGCGCC CAACGATTAC CTTAAATCGG CACCGTTGAG CAACATTCCC GTTGCCTGGG GCAGTACCGA AGCCATACAG CGCGAGCAGA TCGGGACCCA GAAATGGCTG GCTATTTTCC CTGATGGTTT TGAAGGCTGG GCCGAATATC GCCGAACCCG CTTCCCGAAA CTATACCCCG TCGTAAACTC CGACAACCCC GATATTCCGG CTGGTGGGGT CCTGCGCCGT ATTCCGATTC TGCTGGTCGA ACAGCAAACC AACGCTGTTG AAGCCAAGAA AGCCGAGACG TTGCTGGGTG GCCCCGATAA GGTGACAACG CCCTTATGGT GGGACAAAAA CTAA
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Protein sequence | MTSYKTIVRK TVVAAFLSAP LFWATGCTKN FDEINTNQTK ITIIGAGEIP YLFSKAQSAA TLPGGNYQVG QNLFSDQYAQ YFACVATYFP SDRFVIRMDW LGGPWTSLYT QVVPQLKTIM SSADPNSAEY ALASIWWVYS FHRWTDYVGP IPYFKAGEPA TSVPYDPQDK IYDDFFKRLA AATTVLKAKT AEKPFGAFDL IYGGDATKWI KFANTLRLRL ALRISKVDPA RAKTEAEAAV AGGVLTTSPD DDALVQRSTK GGDNNGLAIM SDWNEFRMSA AMESVLKGYE DPRLPTYFLP AVKTNTYEGL RNGLGTTQLT ETVNTADYNS HVGQRWTSTG LGTAQNVMAT AESYFLRAEG ALNGWNMGGT AKDFYLQGIA NSMKQWGVSD AAAIAAYQNS TKTPIAPNDY LKSAPLSNIP VAWGSTEAIQ REQIGTQKWL AIFPDGFEGW AEYRRTRFPK LYPVVNSDNP DIPAGGVLRR IPILLVEQQT NAVEAKKAET LLGGPDKVTT PLWWDKN
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