Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3891 |
Symbol | |
ID | 8727649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4666110 |
End bp | 4667006 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | Poly(3-hydroxybutyrate) depolymerase-like protein |
Protein accession | YP_003388680 |
Protein GI | 284038750 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.947481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.780646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTACG CTCGTATGTT AAAAGTAACT TTCCTGTTTT TTCTGGTCGG TCTTGGGCTC TCGTCGGCGA GCGCGGAGGT CATTAGTGAT TCTGTACTGA TTGAAGGCCA TTATCGGTCG TTTCATTATA ACAATGTCTC CGTAGCGTCG GTTAAGCGGC CGGGGCTGAT TTTTGTCCTG CATGGGTCCG GTGGTAACGG GCAGGGGCAG ATAAAATCCG CTGCAAAAAT GGAGCAGCAG GCCAATGCGG AAAATATGCT GGTCGTTTAT CCGGATGGCT ACAAGCGTTA CTGGAACGAA TGCCGGAAAG CCTCGCCGGC AGAGGCCAAT GTCGAAAATG TGAATGAGCA GGCTTTCTTC GAAGGCATGA TTCAGTACTT CGAGAAACGC TATAACGTGG ACCGGTCGCA CGTATTTGCC GTGGGTACAT CGGGCGGTGG GCATATGGCG TATAAACTGG CCCTGACCAT GCCGCGTACG TTCCGGGCCA TCACGGCCAT TATCGCCAAT CTGCCCGATA CAACGAATAT GGACTGTACG CCATCCGGCA AGGCTGTGCC GGTCATGATC GTCAACGGCA CGCTGGATAA AACAAATCCC TACGAGGGTG GCGTTGTCGT GCTGGGCAAA AACATGACTA TGGGGGCCGT GCGATCCACC GACCGCACTC TGGCCTACTG GGCCGATCTG GCTCGCTATA AAGGCAAACC AACCCAGGAA AACCTGCCCG ATACCGACCC GACCGACGGG AAAACCATTG AACGGTATAC CTACAAAGAG AAAGGAAAGC CCGAAATTGT GCTCCTGAAA GTGATTGGTG GAAAACACGA CTACCCCAAC GACATTGACG TTCATGTGGA AGCACTGCGC TTTTTCATGC GGCAGATCGG GAGGTGA
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Protein sequence | MLYARMLKVT FLFFLVGLGL SSASAEVISD SVLIEGHYRS FHYNNVSVAS VKRPGLIFVL HGSGGNGQGQ IKSAAKMEQQ ANAENMLVVY PDGYKRYWNE CRKASPAEAN VENVNEQAFF EGMIQYFEKR YNVDRSHVFA VGTSGGGHMA YKLALTMPRT FRAITAIIAN LPDTTNMDCT PSGKAVPVMI VNGTLDKTNP YEGGVVVLGK NMTMGAVRST DRTLAYWADL ARYKGKPTQE NLPDTDPTDG KTIERYTYKE KGKPEIVLLK VIGGKHDYPN DIDVHVEALR FFMRQIGR
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