Gene Slin_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3855 
Symbol 
ID8727613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4626508 
End bp4627146 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content51% 
IMG OID 
ProductAcetyltransferase (isoleucine patch superfamily)- like protein 
Protein accessionYP_003388644 
Protein GI284038714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.895064 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC TCCACATCAT AAGGCAGAAT ACCACTCTTA AACGGTTTGT CCACTACCTG 
CTTATCCCGA CGGGGCAAGC CCGGCCCCGT CGTTGGGTAA GCTGGTTCGT CAACCCGATT
GTACACGACC GGCACCGAAC CTCCATAGTA CGTAGTACAG CGCGGCTCGA TGTACTGCCT
TTTCGGGTAT TCGAGCTAGG CATCCAGTCG ACAGTTGAAG ACTATAGCGT AATAAATAAT
GGCGTAGGCG ATATACAAAT CGGTGATTTC TGCCGAATCG GCATTGGGTC GGTCGTTATT
GGCCCGGTCA GCATCGGAGC CCATGTCATT CTGGCCCAGC ACGTTGTCAT GTCGGGCTTA
AATCACGGAT ACGAAGACAT CAATACACCC ATCCGTCTAC AGCCCGTTAC GACTCAACCC
ATAGTTGTGG AAGACGAATG CTGGATTGGT GCCAATTCGG TGATTACGGC GGGGGTTAAA
ATTGGAAAGC ATTCCGTGGT GGCCGGAGGC AGCGTAGTGA CCAAAGATGT GCCACCCTAT
TGCATTGTAG CGGGGAATCC GGCACGAATA ATAAAACAGT ACGATTTCAG CCAGAATGAA
TGGGTGAAAG TAACAAGCGT CAGTAAAATA CCAGCCTAA
 
Protein sequence
MKPLHIIRQN TTLKRFVHYL LIPTGQARPR RWVSWFVNPI VHDRHRTSIV RSTARLDVLP 
FRVFELGIQS TVEDYSVINN GVGDIQIGDF CRIGIGSVVI GPVSIGAHVI LAQHVVMSGL
NHGYEDINTP IRLQPVTTQP IVVEDECWIG ANSVITAGVK IGKHSVVAGG SVVTKDVPPY
CIVAGNPARI IKQYDFSQNE WVKVTSVSKI PA