Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3701 |
Symbol | |
ID | 8727454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4462661 |
End bp | 4465105 |
Gene Length | 2445 bp |
Protein Length | 814 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | protein of unknown function DUF214 |
Protein accession | YP_003388502 |
Protein GI | 284038572 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000785399 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000000250396 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTTAACA ACTATGTCAT AAGCGCCTGG CGCAGCTTAA AGCGCCAGAA ACTGGCTTCA TTCATTAATC TGCTGGGATT AATCGTCAGT GTGTCCAGTT GTGTGCTGAT TATGGTGTAT GTTCAGCATG AGTTGAGTTA TGACAACTAC CACCTTAAGG CCGACCGCAT CTTCCAATTA ACAACCCAAT TAACCGTGGA TGGAAAAGAA GACCATACGG CTTGGGCCCC TAATTTCATC GGCCAACAGC TAAAGATAGA CTATCCGGAG GTCGAAGAGG TCATTCGACT GCAAGCCAAT CCCGGCAACA TTTCTTTCAA AGTAGCCTCT CAGCTAACTA ATAAAGCGCC ACGCGTACTT AGTCTGGATC AGGTATATAC CGTGTATGAT CCAGCCTTTT TAACTGTCTT TACCTATCCC ATGTTAACAG GTGATCCGAA AACGGCTTTA GCCCGTCCCG GATCTGTCGT CATTACGGAA CAGGTAGCCC GAAGGCTTTT TGGTAACGAC TGGAACCAGA GGAAAGAGGT AGTTGGCCAA CTACTCCAGT CAGGGGGGAA CACTTATCAG ATCACCGGCG TACTACGAGA CATCCCATCC AATACGGATA TGCCCTTCCA GGTACTCATT GCGCAAAAGG CGGAGAGTTT AGAAAAGCAG GCTTGGTGTA CTAGCTACGT AGTATTTAAA CAGGCGGCCA GCAGTATCGA CTTTTCCCCA AAGCTGGCCA AGGTCGCCGA GCCCATTCAG GCTGACTTTG CCAAACGGGG TGGCCACATT GCCTTTGTCT TGGAAAACCT GAGGGATATT CACTTAGGGA AACCTAAACT CTTCGATACG CCCAAGGCCA ATCGATCCTA CTTAATTATC TTTTCCCTGG TAGCTGGGTT TCTGTTGCTG ATTGCCTCGA TCAATTATAT CAATCTTTCC CTAGCTCAAT CAGTCGGGCG AAGCCGGGAA GTGGGCGTTC GCAAAGCGAT CGGAGCCGCT CGCTTCCAGG TCCTGATTCA ATTTCTGGGC GAGTCCCTGT TGTTGACCGG CCTGGCCATC GTGCTCTCGA TGCTACTGGT GATTCTACTG CTGCCCGTCT ATAATGAAAT AACGGAGATG CATTTCTCGC TTTCCTCTCT GATGACTTGG CCGATGGCTG GCCTGCTGGG CGCTATTTTT GTCATCGTTG GCGTTTTGGC CGGGAGCTAT CCCGCCTTTT ACTTGGCTTC TTTTGAGCCC GTAACGGCCT TAAAGGGCAA ACTTCGGCTG GGAGGGAAAT CTGCCCGATT ACAAATGGGC CAGTTGCTGG TCGTACTTCA GTTTACCATT TCGATCACTA TTATCATTGG TACACTGGTC GTCTATAAAC AATTACACTA TCTGCAACAT AAGAATCTGG GCTTTCAAGG GGAACAGGTG CTGATATTGG ATATTCCTCA GCAAGCCGTC AACAGCGGAG CCATAGCCTC ACTCAAGGAA GCGCTTGCTG GCTTAGCCTA TGTACGGGGG GTAACCCTAA TCGGTTCCCA TTCCCTGCCT AGCCAAGAGA TGAACCTATC AGCATTCAAT CTGGAAAAGG ATGGCAAGAT GCTACCATTG CCCCAACGCT CCATTAGCGT AGACGAAAAC TACTTGACCC TATTAAGTAT CCCCCTCATC GCCGGTAGGA ATTTTGTCGA TGCCCGGATG AGGGGTGAGG AGACCGGTCA AGTAGTCCAT GAGGTGCTAG TCAATGAGGC ATTGGTGACG AAGATGGGAT GGAAAGTAGA AGCAGCCATC GGCAAGGACA TCAGTCAAGG GCCCCTTGGA GCCGAAACGT GGCGCGGACG AGTGGTCGGG GTCGTCAAAA ATTTCCATTT CCAGTCCCCC CAACAGCCGA TCGAGCCGAT GGTCTTGCAA AACAATGCCT GGCAAGGACC CGAAAAAGTG CTGGTGGGTT TATCCATCAA CGCACTAACG GATGGACTTA ACCTGGTCGA AAACCAGTGG AAAAGGATCT TGCCGGATCA TGCGTTTGAG GTTACGTTTC TGGATGCAAC CTTTGCCCAG CAATACCGGC AGGAACAACG ACTGGTCACG ATCTTTAGCT ATTTTAGCCT GCTAACTATT GTTGTAGCCT GCCTAGGTTT ATTCGGCTTG TCCTCTTTTG CCACCGCTCA GCGGACTAAG GAAGTAGGGG TTCGTAAAGT AATGGGTGCT CAGTCATATA GCCTAGTTTA TCTGCTATCT AGGCAATTTC TCTTGTTGGT TGGCTTGTCC ATCCTCCTGG CGAGTCCATT GGCCTGGTTT ACGATGAAGC GATGGTTACA GGATTTTGCC TACCATATTT CGATAGGCTG TGGTGAATTT GTGCTGGCTG GTGGTGCAGC CTTTTTAATT GCTAGCTTAA CGACGAGCTA TCATGCCATA CGGCTGGCTC GTACGAATCC AGTACGGGCT TTGCGGTATG AATAG
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Protein sequence | MLNNYVISAW RSLKRQKLAS FINLLGLIVS VSSCVLIMVY VQHELSYDNY HLKADRIFQL TTQLTVDGKE DHTAWAPNFI GQQLKIDYPE VEEVIRLQAN PGNISFKVAS QLTNKAPRVL SLDQVYTVYD PAFLTVFTYP MLTGDPKTAL ARPGSVVITE QVARRLFGND WNQRKEVVGQ LLQSGGNTYQ ITGVLRDIPS NTDMPFQVLI AQKAESLEKQ AWCTSYVVFK QAASSIDFSP KLAKVAEPIQ ADFAKRGGHI AFVLENLRDI HLGKPKLFDT PKANRSYLII FSLVAGFLLL IASINYINLS LAQSVGRSRE VGVRKAIGAA RFQVLIQFLG ESLLLTGLAI VLSMLLVILL LPVYNEITEM HFSLSSLMTW PMAGLLGAIF VIVGVLAGSY PAFYLASFEP VTALKGKLRL GGKSARLQMG QLLVVLQFTI SITIIIGTLV VYKQLHYLQH KNLGFQGEQV LILDIPQQAV NSGAIASLKE ALAGLAYVRG VTLIGSHSLP SQEMNLSAFN LEKDGKMLPL PQRSISVDEN YLTLLSIPLI AGRNFVDARM RGEETGQVVH EVLVNEALVT KMGWKVEAAI GKDISQGPLG AETWRGRVVG VVKNFHFQSP QQPIEPMVLQ NNAWQGPEKV LVGLSINALT DGLNLVENQW KRILPDHAFE VTFLDATFAQ QYRQEQRLVT IFSYFSLLTI VVACLGLFGL SSFATAQRTK EVGVRKVMGA QSYSLVYLLS RQFLLLVGLS ILLASPLAWF TMKRWLQDFA YHISIGCGEF VLAGGAAFLI ASLTTSYHAI RLARTNPVRA LRYE
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