Gene Slin_3679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3679 
Symbol 
ID8727432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4439167 
End bp4440015 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003388484 
Protein GI284038554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.155441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.561455 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCT ATCCGTCAAC CTACGCTACG GTACCAACTG AGTTCATTAC CGCTGCCAAT 
GGCATCACCT TTGCCTATCG CCGACTTGGC CAGAAACAGG CGGTTCCGAT CATTTACTTC
GGTCACCTGA CGTCTAATCT GGACAATGCA GACCCCCGCA TCATGGATGC ACTGGCCGCC
CAGCACGAAA TCATTTCCTT CGATTACCGG GGCGTGGGCG CCACATCGGG TAACGATGCC
GAAACTATTG CCGATATGGC GAAAGACGGA CTGGCGTTTA TCAAGGCGCT GGGCTACGAA
AAAGTAGATA TTCTGGCCTT CTCGATGGGC GGTTTTATCA TTCAGGAACT GATGGCGATG
GAACCTACCC TGGTGCGTAA ACTGATTCTG GCCGGCACGG GCCCACGGGG TGGCGAAGGC
ATCAGCGATG TGGTTAGGCT TACGTACCTG GACATAGCCA AGGCTTTGTT TACGTTCGTG
GACCCCAAAT TTTACCTGTT TTTTAACTCG ACCGACGCGG GCAAACAGGC TGCCCGTCTG
TTCCTGGATC GCCTGAAGGA ACGGACTGAA AACCGTGATA CGGCGGTCGG ATTCGGAACG
TTACAAACGC AGCTCCACGC CATCAAAGTA TGGGGACACG AGCCACCCGC CGACTTGTCG
GTTTTTACAT TACCGGTGTT GGTGATCAAT GGCGATAACG ACAGAATGGT GCCTACGCCT
AACTCCTACG ATCTGGCCAA ACGGCTCCCT AACGCGCAGT TGCACATTTA TGAAAATGCC
GCCCACGGTG CCCTTTTCCA GTATCACGAA GATTTTGTAA AACGCGCTTT GGCTTTTTAC
GCTGCCTGA
 
Protein sequence
MTTYPSTYAT VPTEFITAAN GITFAYRRLG QKQAVPIIYF GHLTSNLDNA DPRIMDALAA 
QHEIISFDYR GVGATSGNDA ETIADMAKDG LAFIKALGYE KVDILAFSMG GFIIQELMAM
EPTLVRKLIL AGTGPRGGEG ISDVVRLTYL DIAKALFTFV DPKFYLFFNS TDAGKQAARL
FLDRLKERTE NRDTAVGFGT LQTQLHAIKV WGHEPPADLS VFTLPVLVIN GDNDRMVPTP
NSYDLAKRLP NAQLHIYENA AHGALFQYHE DFVKRALAFY AA