| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3596 |
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| Symbol | |
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| ID | 8727349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 4353920 |
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| End bp | 4355425 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | |
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| Product | amino acid/peptide transporter |
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| Protein accession | YP_003388402 |
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| Protein GI | 284038472 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.161382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0248648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTTA TTGTTCCTAA GCCCGTTCGT ACGGCTACTC TTTTTGGCCA CCCGATGGGG
CTTTTTGTTT TGTTTTTCAC CGAGATGTGG GAGCGGTTCA GCTACTACGG TATGCGGGCT
ATACTGCTCC TGTTTCTGAT CGACAATGTT CGGGGTGGAT TGGGTCTTAG TGAAGCCGAT
GGCGCAGCTA TTTATGGTAT TTATACCGCA TCGGTATACC TCCTTTCGTT ACCGGGGGGA
TGGCTTGCCG ACAATATACT AGGGCAGCGG AAATCAATCT GGTATGGTGG TATAATCATA
ATGCTGGGGC ATATCATACT GGCTTTCCCG TCGGGTCCTG GTCTGTTTTA CACTGGATTA
TGTGTAGTGG CCCTGGGTAC GGGCCTGCTA AAGCCAAATA TCAGCAGCAT TGTGGGCGAA
CTATATCCCG AAGGTGGTGC CCGTAAAGAT GCGGCTTTTT CTATCTTCTA CATGGGAATC
AATACGGGTT CACTGCTCGG TATTTCCATT GTAGGTTATT TGGGTCAGAA AGTTGGCTGG
CACTATGGTT TTGGCGCAGC TGCTGTAGCA ATGGCTCTGG GAATCATCAC CTATCGTACA
TTTGGCCAAC GGTACCTCGG CGACAAGGGT AATTTTGTTG CTCCAGAACC TAAAACCGCC
GGTCAGTCGT CGAGTGGTAA CCGTTCATTG CTTGTGTTTG TCGCGTTCAT TGTAGGCTTA
ATGGCCGCGC TGCAATTGAC GGGTGTTCTT GACTTGACTA CCGCACAGGG CCTGGCCAAA
GGAATGGGTA CCATTATTTC ACTCATTGCC CTGAGTTACT TCGCTTATAT TCTGATTGCG
GGTGGGCTGG ATAGTACGGA GAAAAAGCGC GTGGTTGTGT TATTCGTCTT TTTCCTGGCT
GCGGCCATGT ATTGGGCAGG AAATGAGCAA CAGGGCTCAT CGCTACAGAT TTTTGCGGAT
CGATATACCG ATTTGCTGTT TTTTGGCTGG CAGATACCCT CAAGCTGGTT CCAGAATCTA
AATCCTGCCT TTATTCTGAT TTTCTCGCCT GTGCTTGCTG CGTTATGGGT CTTTCTGGCG
AACAACAAAA TTGATTTTTC TGTACCAGCC AAGTTCGCCG TTTCGCTGCT ACTACTTGGA
CTGGCTTACG TGGTGATGGT TTTCGCAGCC AACGTTGCCC TGACGGGCGT ACGCACATCG
CCACTGTATC TGACCACCAC TTATCTGTTT TTTACCGTAG CTGAATTGTT CTTAAGTCCG
GTAGGTCTGA GTGCGTTTTC CAAGCTGTCT CCCCGACGCT ACACCAGCCA GTTAATGGGC
CTGTGGTTCG TAGGCTCATC ACTGGGTAAC TTGATTGCAG GGTTATTCGC TGGTGGTTTC
GATGAGAAAA ACGTGCAGCA GATGCCCAAT CTTTTCCAGA GCGTAGCCAT ATTCACACTT
GTTGCAGGGT TTGTCCTGTT GCTATTCTCC AAACCACTGA AAAAGTGGAT GGGTGGAATT
AATTAA
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| Protein sequence | MDVIVPKPVR TATLFGHPMG LFVLFFTEMW ERFSYYGMRA ILLLFLIDNV RGGLGLSEAD
GAAIYGIYTA SVYLLSLPGG WLADNILGQR KSIWYGGIII MLGHIILAFP SGPGLFYTGL
CVVALGTGLL KPNISSIVGE LYPEGGARKD AAFSIFYMGI NTGSLLGISI VGYLGQKVGW
HYGFGAAAVA MALGIITYRT FGQRYLGDKG NFVAPEPKTA GQSSSGNRSL LVFVAFIVGL
MAALQLTGVL DLTTAQGLAK GMGTIISLIA LSYFAYILIA GGLDSTEKKR VVVLFVFFLA
AAMYWAGNEQ QGSSLQIFAD RYTDLLFFGW QIPSSWFQNL NPAFILIFSP VLAALWVFLA
NNKIDFSVPA KFAVSLLLLG LAYVVMVFAA NVALTGVRTS PLYLTTTYLF FTVAELFLSP
VGLSAFSKLS PRRYTSQLMG LWFVGSSLGN LIAGLFAGGF DEKNVQQMPN LFQSVAIFTL
VAGFVLLLFS KPLKKWMGGI N
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