Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3596 |
Symbol | |
ID | 8727349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 4353920 |
End bp | 4355425 |
Gene Length | 1506 bp |
Protein Length | 501 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | amino acid/peptide transporter |
Protein accession | YP_003388402 |
Protein GI | 284038472 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.161382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0248648 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGTTA TTGTTCCTAA GCCCGTTCGT ACGGCTACTC TTTTTGGCCA CCCGATGGGG CTTTTTGTTT TGTTTTTCAC CGAGATGTGG GAGCGGTTCA GCTACTACGG TATGCGGGCT ATACTGCTCC TGTTTCTGAT CGACAATGTT CGGGGTGGAT TGGGTCTTAG TGAAGCCGAT GGCGCAGCTA TTTATGGTAT TTATACCGCA TCGGTATACC TCCTTTCGTT ACCGGGGGGA TGGCTTGCCG ACAATATACT AGGGCAGCGG AAATCAATCT GGTATGGTGG TATAATCATA ATGCTGGGGC ATATCATACT GGCTTTCCCG TCGGGTCCTG GTCTGTTTTA CACTGGATTA TGTGTAGTGG CCCTGGGTAC GGGCCTGCTA AAGCCAAATA TCAGCAGCAT TGTGGGCGAA CTATATCCCG AAGGTGGTGC CCGTAAAGAT GCGGCTTTTT CTATCTTCTA CATGGGAATC AATACGGGTT CACTGCTCGG TATTTCCATT GTAGGTTATT TGGGTCAGAA AGTTGGCTGG CACTATGGTT TTGGCGCAGC TGCTGTAGCA ATGGCTCTGG GAATCATCAC CTATCGTACA TTTGGCCAAC GGTACCTCGG CGACAAGGGT AATTTTGTTG CTCCAGAACC TAAAACCGCC GGTCAGTCGT CGAGTGGTAA CCGTTCATTG CTTGTGTTTG TCGCGTTCAT TGTAGGCTTA ATGGCCGCGC TGCAATTGAC GGGTGTTCTT GACTTGACTA CCGCACAGGG CCTGGCCAAA GGAATGGGTA CCATTATTTC ACTCATTGCC CTGAGTTACT TCGCTTATAT TCTGATTGCG GGTGGGCTGG ATAGTACGGA GAAAAAGCGC GTGGTTGTGT TATTCGTCTT TTTCCTGGCT GCGGCCATGT ATTGGGCAGG AAATGAGCAA CAGGGCTCAT CGCTACAGAT TTTTGCGGAT CGATATACCG ATTTGCTGTT TTTTGGCTGG CAGATACCCT CAAGCTGGTT CCAGAATCTA AATCCTGCCT TTATTCTGAT TTTCTCGCCT GTGCTTGCTG CGTTATGGGT CTTTCTGGCG AACAACAAAA TTGATTTTTC TGTACCAGCC AAGTTCGCCG TTTCGCTGCT ACTACTTGGA CTGGCTTACG TGGTGATGGT TTTCGCAGCC AACGTTGCCC TGACGGGCGT ACGCACATCG CCACTGTATC TGACCACCAC TTATCTGTTT TTTACCGTAG CTGAATTGTT CTTAAGTCCG GTAGGTCTGA GTGCGTTTTC CAAGCTGTCT CCCCGACGCT ACACCAGCCA GTTAATGGGC CTGTGGTTCG TAGGCTCATC ACTGGGTAAC TTGATTGCAG GGTTATTCGC TGGTGGTTTC GATGAGAAAA ACGTGCAGCA GATGCCCAAT CTTTTCCAGA GCGTAGCCAT ATTCACACTT GTTGCAGGGT TTGTCCTGTT GCTATTCTCC AAACCACTGA AAAAGTGGAT GGGTGGAATT AATTAA
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Protein sequence | MDVIVPKPVR TATLFGHPMG LFVLFFTEMW ERFSYYGMRA ILLLFLIDNV RGGLGLSEAD GAAIYGIYTA SVYLLSLPGG WLADNILGQR KSIWYGGIII MLGHIILAFP SGPGLFYTGL CVVALGTGLL KPNISSIVGE LYPEGGARKD AAFSIFYMGI NTGSLLGISI VGYLGQKVGW HYGFGAAAVA MALGIITYRT FGQRYLGDKG NFVAPEPKTA GQSSSGNRSL LVFVAFIVGL MAALQLTGVL DLTTAQGLAK GMGTIISLIA LSYFAYILIA GGLDSTEKKR VVVLFVFFLA AAMYWAGNEQ QGSSLQIFAD RYTDLLFFGW QIPSSWFQNL NPAFILIFSP VLAALWVFLA NNKIDFSVPA KFAVSLLLLG LAYVVMVFAA NVALTGVRTS PLYLTTTYLF FTVAELFLSP VGLSAFSKLS PRRYTSQLMG LWFVGSSLGN LIAGLFAGGF DEKNVQQMPN LFQSVAIFTL VAGFVLLLFS KPLKKWMGGI N
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