Gene Slin_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3548 
Symbol 
ID8727301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4280573 
End bp4281001 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003388354 
Protein GI284038424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.232443 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTG ACCTATCGCC CGAAGTAACG GACCATTTGC TAAGTACACA GTTTTTTGGT 
CGTATCGGCT GTGCTGCCGA TGGACAGGTA CTGGTGCTGC CGGTCAGCTA TCTATATGAT
GGACAGGCTA TTTATGGGCA GACCTGCGAA GGGACCAAAA CCCGGTTACT CCGCAAAAAT
CCGGCCGTCT GTTTCGAGGT CGACGACAGT TGCGGACCGG ATTGCTGGCG CAGTGTCGTT
GTGCAGGGTG TGTATGAAGA GTTGCAGGGC GATGAACGGG TATATGCCGA ACAACGGCTG
GGCCCGGGCC GGATAGCGCC CGTTAAAGAA TCCGCTGTCG GCGAAACAAA CACCGAACGC
CCCGCTGTCA ATGTAGTGTA CCGCATTCGG ATTCTCAGCA AAACAGGTCG GACTGAGATA
AAGTCGTGA
 
Protein sequence
MLRDLSPEVT DHLLSTQFFG RIGCAADGQV LVLPVSYLYD GQAIYGQTCE GTKTRLLRKN 
PAVCFEVDDS CGPDCWRSVV VQGVYEELQG DERVYAEQRL GPGRIAPVKE SAVGETNTER
PAVNVVYRIR ILSKTGRTEI KS