Gene Slin_3540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3540 
Symbol 
ID8727293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4272724 
End bp4273737 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content55% 
IMG OID 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003388346 
Protein GI284038416 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGG CTGTCCTGCA CGGATATGGG CAGCCATTAC AACTCGAAAC GATTCCGGTA 
CCAACCGTTG GACCCGGTCA GATACTGGTT AAAGTAGCCG CGTGTGGCGT TTGTCATACC
GATTTGCACG CCATTGATGG CGACTGGCCC GTTAAGGCCA CCCTGCCGCT CATTCCCGGC
CACGAAGGCG TGGGTACCGT TGTGGCGGTG GGAGCGGGCG TAACCCATAT CCACGAAGGC
GACCGGGTTG GTGTTCCCTG GCTTTACTCC GCCTGTGGGC ACTGCGAATA CTGCTATTCG
GGTTGGGAAA CACTTTGTCA TAATCAGCAG AATACGGGCT ATTCAGTGCA GGGAAGCTAT
GCCGAATACG TAGTTGCCAA CCCCGATTAT GTAGGTCATA TTCCCGATAG CCTGTCGTTC
ATCGACGCGG CCCCCATCCT CTGTGCTGGC GTGACGGTAT ATAAGGGTCT GAAAGAAACA
GAAGTAAAAC CGGGCGAATG GGTAGTTATT TCGGGTATTG GCGGGCTGGG TCACCTGGCC
GTTCAGTATG CCAAAGCCAT GGGTATGCAC GTGGTAGCCG TCGATATCAG CTCCGAAAAA
CTGGCGCTGG CGAGCGAAGT TGGTGCCGAT CTAACGATAA ACGCGGCCAC CGAAGATCCT
GCCACTATTG TTCAGGACAA AATTGGTGGA GCGCATGGCG TACTGGTGAC CGCCGTTTCC
CGAACGGCCT TCGCACAGGG CGTGGATATG CTGCGCCGGA AAGGAACGCT CTCGCTGGTT
GGTTTGCCAC CGGGTGATTT TGATGTCAAT ATCTTCGACG TAACCCTGAA CCGGAAAACC
ATTCGCGGCT CCATAGTGGG TACGCGGCAG GATTTAACTG AAAGTCTGGC TTTTGCCGCC
GATGGCAAAG TACACGTCCA TTACCGAACC GAACGACTCG ACAACATCAA CCAGGTACTT
GCCGATATGA AAGCGGGACA GATTGACGGC CGCGTTATTC TGGATTTTCA GTAA
 
Protein sequence
MKAAVLHGYG QPLQLETIPV PTVGPGQILV KVAACGVCHT DLHAIDGDWP VKATLPLIPG 
HEGVGTVVAV GAGVTHIHEG DRVGVPWLYS ACGHCEYCYS GWETLCHNQQ NTGYSVQGSY
AEYVVANPDY VGHIPDSLSF IDAAPILCAG VTVYKGLKET EVKPGEWVVI SGIGGLGHLA
VQYAKAMGMH VVAVDISSEK LALASEVGAD LTINAATEDP ATIVQDKIGG AHGVLVTAVS
RTAFAQGVDM LRRKGTLSLV GLPPGDFDVN IFDVTLNRKT IRGSIVGTRQ DLTESLAFAA
DGKVHVHYRT ERLDNINQVL ADMKAGQIDG RVILDFQ