Gene Slin_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3517 
Symbol 
ID8727270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4252012 
End bp4253355 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content50% 
IMG OID 
Productbeta-lactamase 
Protein accessionYP_003388323 
Protein GI284038393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTTC TTTCCAAATT CAGGGCGACG GTATTGCTGT TCGCTCTCTC TGTCGTTTCG 
CTGTATGCAC AAACCGGTAC CAGGCAAGCC CCCCCGCTGC TGGCCGCAGC CAATCCTGAA
ACAGTAGGTT TTTCATCAGA ACGACTTAAC CGCATCGACG GGCTTATTCA ATCGTATATC
GACAAAAAGG CATTTCCCGG CGTAACCGCT ATTGTGGTGC GAAACGGTAA GATCGTTTAC
CACAAAGCGT TTGGCACCTC CGATCTCGAC AACAACAAAC CGCTGGCGAA AGATGCGATC
TACCGGATTG CCTCCATGAC CAAAGCCATT ACGTCGCTGG CCGTTATGAT GCTTCATGAG
GAAGGCAAGG TCATGCTCGA TGATCCCATC AGCAAATACA TTCCTGAGTT TGCCAAACCA
GTAGTCCTCG ACAAGTTCAA CGATAAAGAC AGCACTTACA CCACCATTCC AGCCAAGCGG
GAAATTACCA TCCGGCATTT GCTCACCCAC ATGTCGGGAC TCAATTACAA CGTCATTGCC
AGCGACCCAC ACATGCGGGC CATTTATACC AAAGCCGGCA TTGTGGATGC CTTCACGACC
CAGAACATAA AAATTGGCGA TGCCGTCCGA AAACTGGCAA AGCTCCCCCT CAATCACCAA
CCGGGTGAAA AGTGGACGTA TGGCCTGAGT ATTGATGTAT TGGGCGCTTT GGTAGAGGTC
GTGTCGGGGA TGCCGCTGGA CCAGTTCTTC CAGAAGCGCA TTTTTGAGCC GCTGGGTATG
AAAGACACTT ATTTCTATTT ACCTGATTCG AAACGAGACC GCTTAGTAGC CCTATATTCT
GAAGACAAAG ATAAAAAGCT GGTCAAAACG GCCACCCTGA AGAGCCTTCC AACCGATCCT
GATTATCCGA TTGTAGGGGC AAAAGCGTAT TTCTCGGGTG GTGGTGGCTT GTCGAGTACG
GCCTATGACT ACGCCATTTT TCTGCAAATG CTGTTGAACA ACGGGGTCTA CAACGGTAAG
CGTTTCCTCA GCCGCAAGGG CGTCGAGCTG TTTACCAACT CGAACCAGAC CGGCACCCTT
TTTCCCGATC CGAACAGCTA TTTCAGTCTG GGCTTCGCTG TCACGAACGA AAAAGGGCGC
ACACAGGATT TGGGCAGCGT AGGTACGTTC TCCTGGGGTG GTGCTTTCAG CACCGATTAC
TTTGCTGATC CGAAAGAGAA AATCTGCGCT GTTCTGATGA AGCAAATGTG GGGAACAAGC
TACGGCAGTG AACTCGACAA CAAATTCAGC CTGATGATCT ATCAGGCCCT GGACGATCAG
GAGGTTATCG AACCGGGCAA TTAA
 
Protein sequence
MTFLSKFRAT VLLFALSVVS LYAQTGTRQA PPLLAAANPE TVGFSSERLN RIDGLIQSYI 
DKKAFPGVTA IVVRNGKIVY HKAFGTSDLD NNKPLAKDAI YRIASMTKAI TSLAVMMLHE
EGKVMLDDPI SKYIPEFAKP VVLDKFNDKD STYTTIPAKR EITIRHLLTH MSGLNYNVIA
SDPHMRAIYT KAGIVDAFTT QNIKIGDAVR KLAKLPLNHQ PGEKWTYGLS IDVLGALVEV
VSGMPLDQFF QKRIFEPLGM KDTYFYLPDS KRDRLVALYS EDKDKKLVKT ATLKSLPTDP
DYPIVGAKAY FSGGGGLSST AYDYAIFLQM LLNNGVYNGK RFLSRKGVEL FTNSNQTGTL
FPDPNSYFSL GFAVTNEKGR TQDLGSVGTF SWGGAFSTDY FADPKEKICA VLMKQMWGTS
YGSELDNKFS LMIYQALDDQ EVIEPGN