| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3493 |
|---|
| Symbol | |
|---|
| ID | 8727246 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4226097 |
|---|
| End bp | 4227398 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | dienelactone hydrolase-like protein |
|---|
| Protein accession | YP_003388300 |
|---|
| Protein GI | 284038370 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.44711 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTCGA CTTCTATTCG TTACCTTTTT CTTCTGCTTT TCACGCTGGG AGCTGCCTGG
CAAACCAGTG CTCAAAGCCC TGACAACTCT TTTGTAAATG GTGATCTGTT GCCTAATTCG
CCCGAACTAT CCCCTCGCGG TACCTATGGC GTTGGCGTGC GAACCCTAAA AGTGGTTCAC
AAAGACCAGG TCGATGTACT GCACCAGAAA GACGGCAAAC ACCCGCTCTA CGACCGTTCA
CTTACCCTCG AAGTCTGGTA TCCGGCCCGT ATCCCGGCTG ATAAACAGGC TCTGGTCACG
TATGAATCGG TGCTGGGCCG CGCCAACGAC CCAAAACGTC CGCTTGTTCC ATTCACGTTT
GCAGGTCGGG CCAGTCGCGA CGCCGAGCCG GATGCCAGCG GGGGTGCGTA TCCGCTGGTT
ATCGTGTCGC ATGGGTATCT TGGCTCACGG CTGCTGCTTA CCTACCTGAC CGAAAATCTG
GCTTCCAAAG GCTACGTAGT TGTTGCTATC GACCATATGG AATCGACTTA CAGCGATGCC
GCCGGATTTC CCAGTACCTT GCTGAACCGG GCGCTCGATG ACCTGTTCGT TCTCAATGAA
ATGGCCCGCC TGAGCGCAAA ATCCAGTAAT ACTTTCCTGG CGGGGTTGCT TAATGCCGAT
AATACGGCCC TGATTGGTTA TTCGATGGGC GGCTATGGGG CACTTAACGC CACCGGGGCA
GGATTTAGTC CTCAGGCCGT CAAGATGTTT AGCCAGCTGG CGCAGGGAAG TACTGCCCTT
GAGGTTCGCT CTATGGATTC GCCTGCTTAT AAAGCTTCGC TGGACCCGCG CATCAAGGCC
GTTGTTGCCT TTGCTCCCTG GGGTATGGAA CGGGGTATGT GGGATGCCAA AGGACTGGCG
GGTTTGACGT TGCCGACACT ATTTGTGGCT GGAAGTAAAG ACGATGTGTC AGGCTATGAA
AAAGGCATCA AGGCCATTTA TGATGGAGCC GTCAACGCCA ATCGGTATAT GCTGACCTAC
GTGAATGCCC GGCACAATGT AGCCCCTAAT CCCCCACCAG CGGCTTCGTT CCAGCCAGGC
GTATCGGCCG ATGAGTACAT GCACTATGCC GAACCTGCCT GGAATGAGCG CCGAATCAAC
AACATCAACC AGCATTTTGT GACGGCCTTT CTGGGTATTC ACCTAAAAAA AATGGACTAC
GCCAAGTATC TTGACGTACC CGAGACCGAT GCGGCCGGTA CGTGGACTGG ATTCAAACCC
CGGATGTCGG TGGGTCTGGA AATGCGGCAT GCCAAGCCCT AA
|
|---|
| Protein sequence | MKSTSIRYLF LLLFTLGAAW QTSAQSPDNS FVNGDLLPNS PELSPRGTYG VGVRTLKVVH
KDQVDVLHQK DGKHPLYDRS LTLEVWYPAR IPADKQALVT YESVLGRAND PKRPLVPFTF
AGRASRDAEP DASGGAYPLV IVSHGYLGSR LLLTYLTENL ASKGYVVVAI DHMESTYSDA
AGFPSTLLNR ALDDLFVLNE MARLSAKSSN TFLAGLLNAD NTALIGYSMG GYGALNATGA
GFSPQAVKMF SQLAQGSTAL EVRSMDSPAY KASLDPRIKA VVAFAPWGME RGMWDAKGLA
GLTLPTLFVA GSKDDVSGYE KGIKAIYDGA VNANRYMLTY VNARHNVAPN PPPAASFQPG
VSADEYMHYA EPAWNERRIN NINQHFVTAF LGIHLKKMDY AKYLDVPETD AAGTWTGFKP
RMSVGLEMRH AKP
|
|---|
| |