Gene Slin_3463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3463 
Symbol 
ID8727216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4196426 
End bp4197565 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content54% 
IMG OID 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_003388270 
Protein GI284038340 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.838901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAA CGACCTTAGT ACCGGCCGAA AAACAACGCT ATCAAAAACA CCTGAATTTA 
CCCGAAATCA GTACCAAAGG TCAGTTACTG CTCAAAAATG CCCGTGTTCT GGTAGTAGGC
GCGGGTGGGC TGGGCTGCCC CGTTCTTCTG TACCTGACGG CAGCGGGCGT AGGCACCCTG
GGCGTTATTG ACCCCGATGT TGTTGATCTG AGCAATTTGC AGCGACAAGT GCTCTATACA
ACCGACGAAG TAGGCAAGCC CAAAGCCAAG GTTGCGGTAA GCCACCTCAA TCGGCTCAAC
CCGGAAATTA CATTCGATAC CTACACGATG GCGCTGGACA TCAATAACGC CCGCGCGGTC
ATTGAAGCGT ACGATATTGT GGTCGACTGC ACCGACAATT TCAAAGTACG CTATCTGGTC
AACGACATAT GTGTGACACT CGGCAAACCC TTCGTATATG GTGCTATCCA CCGATTTGAG
GGTCAGGTGG CGGTACTCAA TGCAGACCTG GGCGATGGTA AGCGGGGGCC AACGTACCGG
TGTCTGTTCC CGGACTATCC GAGCGAAATC GAAATACCGA ATTGTAGCAT TACGGGTGTA
TTGGGCGTAC TGCCGGGTGT CATTGGCACG TACCAGGCCA ACGAGGTCAT CAAACTGATA
ACAGGCATCG GGCAGTCGCT CAATGAACAT TTATTCATGA TCGACCTGCT GTCGATGAAC
CAGCAGAAAA TTAAAACCAG GCGGCTACCT AATGCCGTAG ACCTGGCTCG GGAAGGACTG
GCATCAGCAG GAGCGCGACC GGCTCCGGGC ACGTCGGGTC CGCAAAAAAT ATCCGTACAG
GAGCTGTCGG ACCGCATTGC CCTCGGCGAG GATTTGTTTC TGCTGGATGT TCGCGAACGT
CCGGAGTATG AACTATGTCA TCTTGAAGGT GCCGTACTGA TTCCCGTTGG TATGATCCCC
AACAATCGGA AACGGATTCC AACCGACCGC CCCGTTATCG TCTATTGCCA CCACGGCATC
CGGTCGGCCA ATGTAGTGCA ATATCTCTAC GCTCAGGGCG GGCTAACTAA CCTCTACAAT
CTCGACGGCG GCATCAACGC CTGGGCACGG GATATTGAAC CGGAGATGGC CGTGTATTAG
 
Protein sequence
MEATTLVPAE KQRYQKHLNL PEISTKGQLL LKNARVLVVG AGGLGCPVLL YLTAAGVGTL 
GVIDPDVVDL SNLQRQVLYT TDEVGKPKAK VAVSHLNRLN PEITFDTYTM ALDINNARAV
IEAYDIVVDC TDNFKVRYLV NDICVTLGKP FVYGAIHRFE GQVAVLNADL GDGKRGPTYR
CLFPDYPSEI EIPNCSITGV LGVLPGVIGT YQANEVIKLI TGIGQSLNEH LFMIDLLSMN
QQKIKTRRLP NAVDLAREGL ASAGARPAPG TSGPQKISVQ ELSDRIALGE DLFLLDVRER
PEYELCHLEG AVLIPVGMIP NNRKRIPTDR PVIVYCHHGI RSANVVQYLY AQGGLTNLYN
LDGGINAWAR DIEPEMAVY