Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_3451 |
Symbol | |
ID | 8727204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 4183401 |
End bp | 4184366 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | ADP-L-glycero-D-manno-heptose-6-epimerase |
Protein accession | YP_003388258 |
Protein GI | 284038328 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.737757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTG TTACGGGAGC CGCCGGTTTT ATTGGAAGCT GTTTGATCAG CAAGCTTAAT CAGGAAAATT TCAATTTCAT CATTGCTGTT GATGATTTTT CATATCCTGA TAAAGAAGCC AACTTAACGG GAAAGCGGAT TCAGGAACGA GTGGATCGGG AAGATTTTTT TGACTGGCTC GACCAGAATT ACCACGAAGT AGAGTTTCTG TTCCACATCG GCGCCCGGAC CGATACAACG GAGTTTGATC GCCAGATATT TGAGCATTTG AATGTCGAAT ACTCCAAGCA AATCTGGAAT CGCTGTATTC AATATCAAAT ACCACTCGTT TACGCTTCAT CGGCCGCTAC TTATGGCCTG GGCGAATTAG GCTACGACGA CAACGAATCC CTGATCCCGC AGTTGAAGCC GTTAAATCCG TATGGAGACT CCAAAAATGA GTTCGACATC TGGGCTCTGG AACAGGAACG CAAACCATTT TTCTGGGCTG GCCTGAAATT CTTCAATGTC TACGGCCCCA ACGAATACCA CAAAGGCCGG ATGGCCTCCG TGATTTTTCA CACCTTTAAG CAAATCGAAG CCTCTGGCAG CATGAAGCTG TTCCGCTCGC ACAACCCCGA CTATGCGGAT GGCGAACAGA TGCGTGACTT TGTGTATGTA AAAGACGTAG TGGAGGTATG CTCGTTTTTA ATGCACCACC GACGCAATTC GGGTATCTAC AACCTCGGCA GCGGCAAGGC GCGAACCTTC CTCGACTTAG CCAAAAATAC ATTCCACGCG CTCGATCTGG AGCCCAACAT CAGTTTTGTT GATACCCCCG CCGACATTCG GGATAAATAC CAGTACTTCA CGCAGGCCAA CATGGCCAAA CTTCGCTCCA TTGGATACGA CCGCCCTTTC TCATCGCTCG AAGACGGCAT CTCCGACTAT GTAAAAAACT ACCTGAGCAA AGGCGACTAT ATGTAG
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Protein sequence | MIIVTGAAGF IGSCLISKLN QENFNFIIAV DDFSYPDKEA NLTGKRIQER VDREDFFDWL DQNYHEVEFL FHIGARTDTT EFDRQIFEHL NVEYSKQIWN RCIQYQIPLV YASSAATYGL GELGYDDNES LIPQLKPLNP YGDSKNEFDI WALEQERKPF FWAGLKFFNV YGPNEYHKGR MASVIFHTFK QIEASGSMKL FRSHNPDYAD GEQMRDFVYV KDVVEVCSFL MHHRRNSGIY NLGSGKARTF LDLAKNTFHA LDLEPNISFV DTPADIRDKY QYFTQANMAK LRSIGYDRPF SSLEDGISDY VKNYLSKGDY M
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