Gene Slin_3451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3451 
Symbol 
ID8727204 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4183401 
End bp4184366 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID 
ProductADP-L-glycero-D-manno-heptose-6-epimerase 
Protein accessionYP_003388258 
Protein GI284038328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.737757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATTG TTACGGGAGC CGCCGGTTTT ATTGGAAGCT GTTTGATCAG CAAGCTTAAT 
CAGGAAAATT TCAATTTCAT CATTGCTGTT GATGATTTTT CATATCCTGA TAAAGAAGCC
AACTTAACGG GAAAGCGGAT TCAGGAACGA GTGGATCGGG AAGATTTTTT TGACTGGCTC
GACCAGAATT ACCACGAAGT AGAGTTTCTG TTCCACATCG GCGCCCGGAC CGATACAACG
GAGTTTGATC GCCAGATATT TGAGCATTTG AATGTCGAAT ACTCCAAGCA AATCTGGAAT
CGCTGTATTC AATATCAAAT ACCACTCGTT TACGCTTCAT CGGCCGCTAC TTATGGCCTG
GGCGAATTAG GCTACGACGA CAACGAATCC CTGATCCCGC AGTTGAAGCC GTTAAATCCG
TATGGAGACT CCAAAAATGA GTTCGACATC TGGGCTCTGG AACAGGAACG CAAACCATTT
TTCTGGGCTG GCCTGAAATT CTTCAATGTC TACGGCCCCA ACGAATACCA CAAAGGCCGG
ATGGCCTCCG TGATTTTTCA CACCTTTAAG CAAATCGAAG CCTCTGGCAG CATGAAGCTG
TTCCGCTCGC ACAACCCCGA CTATGCGGAT GGCGAACAGA TGCGTGACTT TGTGTATGTA
AAAGACGTAG TGGAGGTATG CTCGTTTTTA ATGCACCACC GACGCAATTC GGGTATCTAC
AACCTCGGCA GCGGCAAGGC GCGAACCTTC CTCGACTTAG CCAAAAATAC ATTCCACGCG
CTCGATCTGG AGCCCAACAT CAGTTTTGTT GATACCCCCG CCGACATTCG GGATAAATAC
CAGTACTTCA CGCAGGCCAA CATGGCCAAA CTTCGCTCCA TTGGATACGA CCGCCCTTTC
TCATCGCTCG AAGACGGCAT CTCCGACTAT GTAAAAAACT ACCTGAGCAA AGGCGACTAT
ATGTAG
 
Protein sequence
MIIVTGAAGF IGSCLISKLN QENFNFIIAV DDFSYPDKEA NLTGKRIQER VDREDFFDWL 
DQNYHEVEFL FHIGARTDTT EFDRQIFEHL NVEYSKQIWN RCIQYQIPLV YASSAATYGL
GELGYDDNES LIPQLKPLNP YGDSKNEFDI WALEQERKPF FWAGLKFFNV YGPNEYHKGR
MASVIFHTFK QIEASGSMKL FRSHNPDYAD GEQMRDFVYV KDVVEVCSFL MHHRRNSGIY
NLGSGKARTF LDLAKNTFHA LDLEPNISFV DTPADIRDKY QYFTQANMAK LRSIGYDRPF
SSLEDGISDY VKNYLSKGDY M