| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_3435 |
|---|
| Symbol | |
|---|
| ID | 8727188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 4161733 |
|---|
| End bp | 4162878 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003388242 |
|---|
| Protein GI | 284038312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA TCAACATCGG TGTCGTTGGC ACCGGATTCA TCGGGCCTGC GCACATCGAA
GCCCTGCGTC GCCTTCCAAA CACAAACGTC CTCGCCCTGT GTGAGGTGAC TCCTGAACTG
GCTCGTCAGA AAGCCGATCA GCTCGGTATT GAGCGGTCCT GCACGTTCGA GGAGCTTCTG
GCCATGGACG ATATTAAGGT TGTACACATC TGTACGCCGA ACTTCCTCCA TTACTCACAG
TCAAAAGCAG CTTTGTTGGC TGGCAAGCAT GTTGTGTGTG AGAAGCCTCT GGCCAAAGAT
TTACACGAAG CCAAAGAACT CGTTGAACTG GCTGAACAAA CTGGTCTGGT CAATGCCGTG
CATTTCAACC TGCGCTATTA CCCGCTGGTT CGCCAGATGA AGGTGATGCG TGAGCAGGAT
GCCCTGGGCG ATGTGTACTC GGTGATCGGT TCCTATTTGC AGGACTGGCT CTTCTACGAC
ACCGATTACA ACTGGCGTCT GGAACCCGAC AAGTCGGGCG ATTCGCGTGC CATTGCTGAT
ATTGGCTCTC ACCTGATGGA CAGCCTCGAA TACATTACGG GCCTGAAAAC GGTAGCCGTT
ATGGCCGATT TCAACACAGT CCATAAAGTG CGGAAAAAGC CGCTGAAGCC CGTGGAGACG
TATTCGGGCA AGATGCTCCA GCCCGAAGAT TACGCTGACG TCCCCATTAA TACCGAAGAC
CATGCCAACG TATTACTGCG GTTCGATAAT GGAAATCGGG GTGTTATCAC GGTGTCGCAG
GTGTCGGCCG GTCGGAAAAA CCAGATGAAG CTGGAGATTG CCGGTTCGAA GAAAACGTTT
GCCTGGAACT CCGAAGCACC CAACGAAATG TGGATCGGTA ACCGCGACGG TGCCAATGAA
GCATTGATGC GCGACCCATC GCTGGCTCAC CCCGAAGCGC GGTCGGTGAT CAGTTTTCCT
GGCGGTCACA ACGAAGGTTT CCCCGACACG TCGAAGCAGT TGTTCAAAGA GGTGTATGCG
GCTATTGAAG CGGGGAAACA ACCCGAAAAT CCGACGTACC CAACCTTTGC CGACGGTTAC
CGCGAGCTGC TCATCTGCGA AAAAATCCTG GAAAGCAACC GCAAACAGGC GTGGGTGGAG
ATTTAA
|
|---|
| Protein sequence | MQKINIGVVG TGFIGPAHIE ALRRLPNTNV LALCEVTPEL ARQKADQLGI ERSCTFEELL
AMDDIKVVHI CTPNFLHYSQ SKAALLAGKH VVCEKPLAKD LHEAKELVEL AEQTGLVNAV
HFNLRYYPLV RQMKVMREQD ALGDVYSVIG SYLQDWLFYD TDYNWRLEPD KSGDSRAIAD
IGSHLMDSLE YITGLKTVAV MADFNTVHKV RKKPLKPVET YSGKMLQPED YADVPINTED
HANVLLRFDN GNRGVITVSQ VSAGRKNQMK LEIAGSKKTF AWNSEAPNEM WIGNRDGANE
ALMRDPSLAH PEARSVISFP GGHNEGFPDT SKQLFKEVYA AIEAGKQPEN PTYPTFADGY
RELLICEKIL ESNRKQAWVE I
|
|---|
| |